Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHGDHO43175 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
PHGDHO43175 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PHGDHO43175 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHGDHO43175 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHGDHO43175 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHGDHO43175 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PHGDHO43175 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHGDHO43175 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PHGDHO43175 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PHGDHO43175 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PHGDHO43175 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PHGDHO43175 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.04■□□□□ 0.8
PHGDHO43175 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PHGDHO43175 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
PHGDHO43175 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PHGDHO43175 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PHGDHO43175 AC034268.1-201ENST00000441047 882 ntBASIC20.04■□□□□ 0.8
PHGDHO43175 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PHGDHO43175 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.04■□□□□ 0.8
PHGDHO43175 AC010536.3-201ENST00000620306 533 ntBASIC20.04■□□□□ 0.8
PHGDHO43175 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.04■□□□□ 0.8
PHGDHO43175 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PHGDHO43175 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PHGDHO43175 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.04■□□□□ 0.8
PHGDHO43175 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
PHGDHO43175 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PHGDHO43175 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.04■□□□□ 0.8
PHGDHO43175 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.04■□□□□ 0.8
PHGDHO43175 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.04■□□□□ 0.8
PHGDHO43175 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PHGDHO43175 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PHGDHO43175 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.03■□□□□ 0.8
PHGDHO43175 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.03■□□□□ 0.8
PHGDHO43175 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHGDHO43175 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHGDHO43175 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PHGDHO43175 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHGDHO43175 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHGDHO43175 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHGDHO43175 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHGDHO43175 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHGDHO43175 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHGDHO43175 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.03■□□□□ 0.8
PHGDHO43175 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHGDHO43175 TERF1P5-201ENST00000477545 1207 ntBASIC20.03■□□□□ 0.8
PHGDHO43175 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.03■□□□□ 0.8
PHGDHO43175 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PHGDHO43175 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PHGDHO43175 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PHGDHO43175 AC087623.3-201ENST00000607047 1098 ntBASIC20.03■□□□□ 0.8
PHGDHO43175 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHGDHO43175 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PHGDHO43175 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHGDHO43175 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.03■□□□□ 0.8
PHGDHO43175 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PHGDHO43175 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHGDHO43175 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHGDHO43175 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PHGDHO43175 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PHGDHO43175 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHGDHO43175 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHGDHO43175 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHGDHO43175 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHGDHO43175 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHGDHO43175 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
PHGDHO43175 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.03■□□□□ 0.8
PHGDHO43175 AC125437.2-201ENST00000625180 2167 ntBASIC20.02■□□□□ 0.8
PHGDHO43175 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PHGDHO43175 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
PHGDHO43175 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PHGDHO43175 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.02■□□□□ 0.8
PHGDHO43175 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.02■□□□□ 0.8
PHGDHO43175 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.02■□□□□ 0.8
PHGDHO43175 AC097381.1-201ENST00000429019 1296 ntBASIC20.02■□□□□ 0.8
PHGDHO43175 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PHGDHO43175 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.02■□□□□ 0.8
PHGDHO43175 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.02■□□□□ 0.8
PHGDHO43175 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.02■□□□□ 0.8
PHGDHO43175 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
PHGDHO43175 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PHGDHO43175 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PHGDHO43175 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.02■□□□□ 0.8
PHGDHO43175 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PHGDHO43175 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PHGDHO43175 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PHGDHO43175 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PHGDHO43175 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.02■□□□□ 0.8
PHGDHO43175 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PHGDHO43175 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
PHGDHO43175 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.79
PHGDHO43175 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.02■□□□□ 0.79
PHGDHO43175 AL691432.2-201ENST00000607222 2038 ntBASIC20.02■□□□□ 0.79
PHGDHO43175 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
PHGDHO43175 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PHGDHO43175 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.02■□□□□ 0.79
PHGDHO43175 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.01■□□□□ 0.79
PHGDHO43175 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
PHGDHO43175 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PHGDHO43175 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms