Protein–RNA interactions for Protein: O15111

CHUK, Inhibitor of nuclear factor kappa-B kinase subunit alpha, humanhuman

Predictions only

Length 745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHUKO15111 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.7■□□□□ 0.9
CHUKO15111 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHUKO15111 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHUKO15111 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHUKO15111 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHUKO15111 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHUKO15111 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CHUKO15111 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHUKO15111 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.69■□□□□ 0.9
CHUKO15111 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHUKO15111 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHUKO15111 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHUKO15111 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.69■□□□□ 0.9
CHUKO15111 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.69■□□□□ 0.9
CHUKO15111 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.69■□□□□ 0.9
CHUKO15111 DUX4L16-201ENST00000555130 1264 ntBASIC20.69■□□□□ 0.9
CHUKO15111 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHUKO15111 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.69■□□□□ 0.9
CHUKO15111 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHUKO15111 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHUKO15111 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHUKO15111 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.69■□□□□ 0.9
CHUKO15111 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHUKO15111 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHUKO15111 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.69■□□□□ 0.9
CHUKO15111 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.69■□□□□ 0.9
CHUKO15111 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.69■□□□□ 0.9
CHUKO15111 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CHUKO15111 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.68■□□□□ 0.9
CHUKO15111 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHUKO15111 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHUKO15111 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.68■□□□□ 0.9
CHUKO15111 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.68■□□□□ 0.9
CHUKO15111 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHUKO15111 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHUKO15111 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHUKO15111 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.68■□□□□ 0.9
CHUKO15111 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHUKO15111 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.68■□□□□ 0.9
CHUKO15111 AC090192.1-201ENST00000517740 490 ntBASIC20.68■□□□□ 0.9
CHUKO15111 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHUKO15111 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHUKO15111 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHUKO15111 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CHUKO15111 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHUKO15111 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHUKO15111 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.68■□□□□ 0.9
CHUKO15111 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHUKO15111 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHUKO15111 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHUKO15111 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.67■□□□□ 0.9
CHUKO15111 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.67■□□□□ 0.9
CHUKO15111 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.67■□□□□ 0.9
CHUKO15111 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHUKO15111 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.67■□□□□ 0.9
CHUKO15111 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CHUKO15111 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.67■□□□□ 0.9
CHUKO15111 AC010536.3-201ENST00000620306 533 ntBASIC20.67■□□□□ 0.9
CHUKO15111 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHUKO15111 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHUKO15111 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.67■□□□□ 0.9
CHUKO15111 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
CHUKO15111 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHUKO15111 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
CHUKO15111 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.67■□□□□ 0.9
CHUKO15111 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHUKO15111 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.67■□□□□ 0.9
CHUKO15111 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHUKO15111 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.67■□□□□ 0.9
CHUKO15111 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CHUKO15111 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CHUKO15111 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHUKO15111 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHUKO15111 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHUKO15111 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHUKO15111 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHUKO15111 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHUKO15111 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.66■□□□□ 0.9
CHUKO15111 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHUKO15111 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.66■□□□□ 0.9
CHUKO15111 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHUKO15111 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHUKO15111 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CHUKO15111 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.66■□□□□ 0.9
CHUKO15111 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHUKO15111 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.66■□□□□ 0.9
CHUKO15111 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.66■□□□□ 0.9
CHUKO15111 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CHUKO15111 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CHUKO15111 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHUKO15111 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHUKO15111 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.66■□□□□ 0.9
CHUKO15111 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.66■□□□□ 0.9
CHUKO15111 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHUKO15111 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHUKO15111 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CHUKO15111 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CHUKO15111 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHUKO15111 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHUKO15111 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms