Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
CHD2O14647 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
CHD2O14647 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
CHD2O14647 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
CHD2O14647 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
CHD2O14647 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
CHD2O14647 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CHD2O14647 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC28.34■■■□□ 2.13
CHD2O14647 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CHD2O14647 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CHD2O14647 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
CHD2O14647 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC28.34■■■□□ 2.13
CHD2O14647 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CHD2O14647 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC28.34■■■□□ 2.13
CHD2O14647 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CHD2O14647 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
CHD2O14647 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
CHD2O14647 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
CHD2O14647 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
CHD2O14647 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC28.33■■■□□ 2.13
CHD2O14647 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
CHD2O14647 AL121894.2-201ENST00000602977 491 ntBASIC28.33■■■□□ 2.13
CHD2O14647 AL358472.4-201ENST00000633140 710 ntBASIC28.33■■■□□ 2.13
CHD2O14647 KRT8P36-201ENST00000489121 1440 ntBASIC28.33■■■□□ 2.13
CHD2O14647 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC28.33■■■□□ 2.13
CHD2O14647 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CHD2O14647 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC28.32■■■□□ 2.12
CHD2O14647 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CHD2O14647 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CHD2O14647 AK4P3-201ENST00000418260 669 ntBASIC28.32■■■□□ 2.12
CHD2O14647 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
CHD2O14647 ABBA01031674.1-201ENST00000635145 728 ntBASIC28.32■■■□□ 2.12
CHD2O14647 AL031985.4-201ENST00000642138 673 ntBASIC28.32■■■□□ 2.12
CHD2O14647 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CHD2O14647 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC28.32■■■□□ 2.12
CHD2O14647 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
CHD2O14647 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC28.32■■■□□ 2.12
CHD2O14647 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC28.32■■■□□ 2.12
CHD2O14647 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
CHD2O14647 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC28.32■■■□□ 2.12
CHD2O14647 AP005242.2-201ENST00000580065 1175 ntBASIC28.32■■■□□ 2.12
CHD2O14647 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
CHD2O14647 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CHD2O14647 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CHD2O14647 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
CHD2O14647 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CHD2O14647 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
CHD2O14647 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC28.31■■■□□ 2.12
CHD2O14647 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC28.31■■■□□ 2.12
CHD2O14647 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CHD2O14647 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
CHD2O14647 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CHD2O14647 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
CHD2O14647 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CHD2O14647 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
CHD2O14647 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
CHD2O14647 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
CHD2O14647 LIN28AP1-201ENST00000429574 405 ntBASIC28.3■■■□□ 2.12
CHD2O14647 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
CHD2O14647 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC28.3■■■□□ 2.12
CHD2O14647 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CHD2O14647 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC28.3■■■□□ 2.12
CHD2O14647 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC28.29■■■□□ 2.12
CHD2O14647 TSPY14P-201ENST00000303979 915 ntBASIC28.29■■■□□ 2.12
CHD2O14647 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC28.29■■■□□ 2.12
CHD2O14647 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC28.29■■■□□ 2.12
CHD2O14647 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
CHD2O14647 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CHD2O14647 C1orf229-201ENST00000623686 2258 ntBASIC28.29■■■□□ 2.12
CHD2O14647 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC28.29■■■□□ 2.12
CHD2O14647 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CHD2O14647 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
CHD2O14647 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC28.29■■■□□ 2.12
CHD2O14647 ISCU-203ENST00000431221 799 ntTSL 2 BASIC28.29■■■□□ 2.12
CHD2O14647 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CHD2O14647 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
CHD2O14647 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC28.28■■■□□ 2.12
CHD2O14647 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
CHD2O14647 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CHD2O14647 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CHD2O14647 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC28.28■■■□□ 2.12
CHD2O14647 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
CHD2O14647 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
CHD2O14647 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC28.27■■■□□ 2.12
CHD2O14647 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC28.27■■■□□ 2.12
CHD2O14647 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC28.27■■■□□ 2.12
CHD2O14647 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC28.27■■■□□ 2.12
CHD2O14647 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC28.27■■■□□ 2.12
CHD2O14647 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CHD2O14647 PPP1R14BP5-201ENST00000440334 435 ntBASIC28.27■■■□□ 2.12
CHD2O14647 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC28.27■■■□□ 2.12
CHD2O14647 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC28.27■■■□□ 2.12
CHD2O14647 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CHD2O14647 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
CHD2O14647 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC28.26■■■□□ 2.11
CHD2O14647 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
CHD2O14647 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CHD2O14647 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CHD2O14647 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CHD2O14647 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms