Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
YJEFN3A6XGL0 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.08■□□□□ 0.96
YJEFN3A6XGL0 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
YJEFN3A6XGL0 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
YJEFN3A6XGL0 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
YJEFN3A6XGL0 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
YJEFN3A6XGL0 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.07■□□□□ 0.96
YJEFN3A6XGL0 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
YJEFN3A6XGL0 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
YJEFN3A6XGL0 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
YJEFN3A6XGL0 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.07■□□□□ 0.96
YJEFN3A6XGL0 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
YJEFN3A6XGL0 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
YJEFN3A6XGL0 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.07■□□□□ 0.96
YJEFN3A6XGL0 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.07■□□□□ 0.96
YJEFN3A6XGL0 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.07■□□□□ 0.96
YJEFN3A6XGL0 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
YJEFN3A6XGL0 TSPY20P-201ENST00000450910 630 ntBASIC21.07■□□□□ 0.96
YJEFN3A6XGL0 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.07■□□□□ 0.96
YJEFN3A6XGL0 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
YJEFN3A6XGL0 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.07■□□□□ 0.96
YJEFN3A6XGL0 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
YJEFN3A6XGL0 AC005829.2-201ENST00000571422 1056 ntBASIC21.07■□□□□ 0.96
YJEFN3A6XGL0 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
YJEFN3A6XGL0 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
YJEFN3A6XGL0 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.06■□□□□ 0.96
YJEFN3A6XGL0 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
YJEFN3A6XGL0 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
YJEFN3A6XGL0 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
YJEFN3A6XGL0 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
YJEFN3A6XGL0 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.06■□□□□ 0.96
YJEFN3A6XGL0 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.06■□□□□ 0.96
YJEFN3A6XGL0 AC023632.3-201ENST00000521633 145 ntBASIC21.06■□□□□ 0.96
YJEFN3A6XGL0 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
YJEFN3A6XGL0 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
YJEFN3A6XGL0 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
YJEFN3A6XGL0 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.06■□□□□ 0.96
YJEFN3A6XGL0 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.06■□□□□ 0.96
YJEFN3A6XGL0 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
YJEFN3A6XGL0 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.05■□□□□ 0.96
YJEFN3A6XGL0 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.05■□□□□ 0.96
YJEFN3A6XGL0 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
YJEFN3A6XGL0 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
YJEFN3A6XGL0 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
YJEFN3A6XGL0 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
YJEFN3A6XGL0 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.05■□□□□ 0.96
YJEFN3A6XGL0 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.05■□□□□ 0.96
YJEFN3A6XGL0 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.05■□□□□ 0.96
YJEFN3A6XGL0 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.05■□□□□ 0.96
YJEFN3A6XGL0 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
YJEFN3A6XGL0 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
YJEFN3A6XGL0 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
YJEFN3A6XGL0 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
YJEFN3A6XGL0 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
YJEFN3A6XGL0 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
YJEFN3A6XGL0 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
YJEFN3A6XGL0 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
YJEFN3A6XGL0 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.04■□□□□ 0.96
YJEFN3A6XGL0 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
YJEFN3A6XGL0 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
YJEFN3A6XGL0 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
YJEFN3A6XGL0 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
YJEFN3A6XGL0 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
YJEFN3A6XGL0 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
YJEFN3A6XGL0 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.04■□□□□ 0.96
YJEFN3A6XGL0 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
YJEFN3A6XGL0 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.04■□□□□ 0.96
YJEFN3A6XGL0 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
YJEFN3A6XGL0 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
YJEFN3A6XGL0 SOX15-203ENST00000570788 1093 ntBASIC21.04■□□□□ 0.96
YJEFN3A6XGL0 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
YJEFN3A6XGL0 AC008403.3-201ENST00000598924 454 ntBASIC21.04■□□□□ 0.96
YJEFN3A6XGL0 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
YJEFN3A6XGL0 AC006557.6-201ENST00000623071 864 ntBASIC21.04■□□□□ 0.96
YJEFN3A6XGL0 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.04■□□□□ 0.96
YJEFN3A6XGL0 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
YJEFN3A6XGL0 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.04■□□□□ 0.96
YJEFN3A6XGL0 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
YJEFN3A6XGL0 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
YJEFN3A6XGL0 LINC01006-201ENST00000333319 2292 ntBASIC21.04■□□□□ 0.96
YJEFN3A6XGL0 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
YJEFN3A6XGL0 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
YJEFN3A6XGL0 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
YJEFN3A6XGL0 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
YJEFN3A6XGL0 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
YJEFN3A6XGL0 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.04■□□□□ 0.96
YJEFN3A6XGL0 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.04■□□□□ 0.96
YJEFN3A6XGL0 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
YJEFN3A6XGL0 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
YJEFN3A6XGL0 GABARAPL3-202ENST00000624044 1851 ntBASIC21.03■□□□□ 0.96
YJEFN3A6XGL0 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
YJEFN3A6XGL0 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.03■□□□□ 0.96
YJEFN3A6XGL0 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.03■□□□□ 0.96
YJEFN3A6XGL0 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
YJEFN3A6XGL0 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
YJEFN3A6XGL0 ESRRAP1-201ENST00000400596 1257 ntBASIC21.03■□□□□ 0.96
YJEFN3A6XGL0 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
YJEFN3A6XGL0 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
YJEFN3A6XGL0 UNC93B4-201ENST00000505679 747 ntBASIC21.03■□□□□ 0.96
YJEFN3A6XGL0 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms