Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 SMG8-203ENST00000578922 2178 ntBASIC15.93■□□□□ 0.14
LINC01548A6NM66 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
LINC01548A6NM66 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC15.93■□□□□ 0.14
LINC01548A6NM66 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINC01548A6NM66 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
LINC01548A6NM66 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC15.93■□□□□ 0.14
LINC01548A6NM66 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINC01548A6NM66 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINC01548A6NM66 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LINC01548A6NM66 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC01548A6NM66 DPP3P2-201ENST00000416030 1696 ntBASIC15.92■□□□□ 0.14
LINC01548A6NM66 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LINC01548A6NM66 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC01548A6NM66 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC01548A6NM66 AC092368.3-202ENST00000574180 1591 ntBASIC15.92■□□□□ 0.14
LINC01548A6NM66 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
LINC01548A6NM66 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC01548A6NM66 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
LINC01548A6NM66 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC01548A6NM66 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC01548A6NM66 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC01548A6NM66 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC01548A6NM66 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC01548A6NM66 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC01548A6NM66 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LINC01548A6NM66 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC01548A6NM66 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC15.92■□□□□ 0.14
LINC01548A6NM66 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC15.92■□□□□ 0.14
LINC01548A6NM66 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
LINC01548A6NM66 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC01548A6NM66 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC01548A6NM66 HLA-B-256ENST00000639848 1089 ntBASIC15.92■□□□□ 0.14
LINC01548A6NM66 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
LINC01548A6NM66 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC01548A6NM66 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
LINC01548A6NM66 MOK-233ENST00000524214 1539 ntTSL 2 BASIC15.92■□□□□ 0.14
LINC01548A6NM66 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC01548A6NM66 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC15.92■□□□□ 0.14
LINC01548A6NM66 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC01548A6NM66 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC15.92■□□□□ 0.14
LINC01548A6NM66 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LINC01548A6NM66 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC15.91■□□□□ 0.14
LINC01548A6NM66 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC01548A6NM66 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC01548A6NM66 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC01548A6NM66 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC01548A6NM66 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
LINC01548A6NM66 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC15.91■□□□□ 0.14
LINC01548A6NM66 PNMA6B-201ENST00000538162 1200 ntBASIC15.91■□□□□ 0.14
LINC01548A6NM66 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC15.91■□□□□ 0.14
LINC01548A6NM66 AC060766.5-201ENST00000590539 871 ntBASIC15.91■□□□□ 0.14
LINC01548A6NM66 AC020907.5-201ENST00000624372 1936 ntBASIC15.91■□□□□ 0.14
LINC01548A6NM66 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC01548A6NM66 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
LINC01548A6NM66 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
LINC01548A6NM66 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC01548A6NM66 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LINC01548A6NM66 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC15.91■□□□□ 0.14
LINC01548A6NM66 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC01548A6NM66 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC01548A6NM66 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC01548A6NM66 LINC01006-201ENST00000333319 2292 ntBASIC15.91■□□□□ 0.14
LINC01548A6NM66 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
LINC01548A6NM66 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINC01548A6NM66 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LINC01548A6NM66 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC15.9■□□□□ 0.14
LINC01548A6NM66 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LINC01548A6NM66 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC15.9■□□□□ 0.14
LINC01548A6NM66 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINC01548A6NM66 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINC01548A6NM66 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LINC01548A6NM66 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINC01548A6NM66 GAS7-202ENST00000396115 929 ntTSL 5 BASIC15.9■□□□□ 0.14
LINC01548A6NM66 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC15.9■□□□□ 0.14
LINC01548A6NM66 SLC29A4P2-201ENST00000504749 1089 ntBASIC15.9■□□□□ 0.14
LINC01548A6NM66 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC15.9■□□□□ 0.14
LINC01548A6NM66 UNC93B5-201ENST00000530315 699 ntBASIC15.9■□□□□ 0.14
LINC01548A6NM66 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINC01548A6NM66 REXO2-208ENST00000539754 791 ntTSL 2 BASIC15.9■□□□□ 0.14
LINC01548A6NM66 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC15.9■□□□□ 0.14
LINC01548A6NM66 AC006557.6-201ENST00000623071 864 ntBASIC15.9■□□□□ 0.14
LINC01548A6NM66 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINC01548A6NM66 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINC01548A6NM66 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINC01548A6NM66 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINC01548A6NM66 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
LINC01548A6NM66 DET1-207ENST00000564406 2315 ntTSL 2 BASIC15.9■□□□□ 0.14
LINC01548A6NM66 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LINC01548A6NM66 PTBP1P-201ENST00000554374 1601 ntBASIC15.9■□□□□ 0.14
LINC01548A6NM66 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINC01548A6NM66 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
LINC01548A6NM66 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINC01548A6NM66 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC15.89■□□□□ 0.13
LINC01548A6NM66 AP005212.1-201ENST00000581547 1997 ntBASIC15.89■□□□□ 0.13
LINC01548A6NM66 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
LINC01548A6NM66 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC15.89■□□□□ 0.13
LINC01548A6NM66 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
LINC01548A6NM66 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINC01548A6NM66 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC15.89■□□□□ 0.13
LINC01548A6NM66 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms