Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TBC1D3FA6NER0 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.16■□□□□ 0.82
TBC1D3FA6NER0 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.16■□□□□ 0.82
TBC1D3FA6NER0 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.16■□□□□ 0.82
TBC1D3FA6NER0 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
TBC1D3FA6NER0 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.16■□□□□ 0.82
TBC1D3FA6NER0 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.16■□□□□ 0.82
TBC1D3FA6NER0 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.16■□□□□ 0.82
TBC1D3FA6NER0 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.16■□□□□ 0.82
TBC1D3FA6NER0 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.16■□□□□ 0.82
TBC1D3FA6NER0 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TBC1D3FA6NER0 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TBC1D3FA6NER0 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.16■□□□□ 0.82
TBC1D3FA6NER0 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.16■□□□□ 0.82
TBC1D3FA6NER0 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TBC1D3FA6NER0 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.16■□□□□ 0.82
TBC1D3FA6NER0 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
TBC1D3FA6NER0 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TBC1D3FA6NER0 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TBC1D3FA6NER0 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TBC1D3FA6NER0 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TBC1D3FA6NER0 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
TBC1D3FA6NER0 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.15■□□□□ 0.82
TBC1D3FA6NER0 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.15■□□□□ 0.82
TBC1D3FA6NER0 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
TBC1D3FA6NER0 AC124016.1-201ENST00000609552 612 ntBASIC20.15■□□□□ 0.82
TBC1D3FA6NER0 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TBC1D3FA6NER0 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TBC1D3FA6NER0 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.15■□□□□ 0.82
TBC1D3FA6NER0 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TBC1D3FA6NER0 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TBC1D3FA6NER0 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TBC1D3FA6NER0 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
TBC1D3FA6NER0 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
TBC1D3FA6NER0 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
TBC1D3FA6NER0 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TBC1D3FA6NER0 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TBC1D3FA6NER0 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TBC1D3FA6NER0 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.14■□□□□ 0.81
TBC1D3FA6NER0 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TBC1D3FA6NER0 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.14■□□□□ 0.81
TBC1D3FA6NER0 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TBC1D3FA6NER0 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TBC1D3FA6NER0 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
TBC1D3FA6NER0 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.14■□□□□ 0.81
TBC1D3FA6NER0 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TBC1D3FA6NER0 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TBC1D3FA6NER0 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
TBC1D3FA6NER0 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TBC1D3FA6NER0 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TBC1D3FA6NER0 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TBC1D3FA6NER0 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TBC1D3FA6NER0 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TBC1D3FA6NER0 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TBC1D3FA6NER0 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TBC1D3FA6NER0 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TBC1D3FA6NER0 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TBC1D3FA6NER0 KRASP1-201ENST00000407852 552 ntBASIC20.13■□□□□ 0.81
TBC1D3FA6NER0 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
TBC1D3FA6NER0 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TBC1D3FA6NER0 AC023632.3-201ENST00000521633 145 ntBASIC20.13■□□□□ 0.81
TBC1D3FA6NER0 PRKY-204ENST00000533551 1019 ntBASIC20.13■□□□□ 0.81
TBC1D3FA6NER0 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.13■□□□□ 0.81
TBC1D3FA6NER0 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.13■□□□□ 0.81
TBC1D3FA6NER0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TBC1D3FA6NER0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TBC1D3FA6NER0 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TBC1D3FA6NER0 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.13■□□□□ 0.81
TBC1D3FA6NER0 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TBC1D3FA6NER0 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TBC1D3FA6NER0 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
TBC1D3FA6NER0 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TBC1D3FA6NER0 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TBC1D3FA6NER0 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TBC1D3FA6NER0 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.12■□□□□ 0.81
TBC1D3FA6NER0 AC133681.1-201ENST00000465482 601 ntBASIC20.12■□□□□ 0.81
TBC1D3FA6NER0 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.12■□□□□ 0.81
TBC1D3FA6NER0 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.12■□□□□ 0.81
TBC1D3FA6NER0 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.12■□□□□ 0.81
TBC1D3FA6NER0 MIR4497-201ENST00000583208 89 ntBASIC20.12■□□□□ 0.81
TBC1D3FA6NER0 AC110285.5-201ENST00000611501 352 ntBASIC20.12■□□□□ 0.81
TBC1D3FA6NER0 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
TBC1D3FA6NER0 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TBC1D3FA6NER0 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TBC1D3FA6NER0 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.12■□□□□ 0.81
TBC1D3FA6NER0 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.12■□□□□ 0.81
TBC1D3FA6NER0 AF106564.1-201ENST00000607058 2553 ntBASIC20.12■□□□□ 0.81
TBC1D3FA6NER0 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
TBC1D3FA6NER0 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TBC1D3FA6NER0 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TBC1D3FA6NER0 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TBC1D3FA6NER0 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
TBC1D3FA6NER0 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TBC1D3FA6NER0 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TBC1D3FA6NER0 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TBC1D3FA6NER0 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.11■□□□□ 0.81
TBC1D3FA6NER0 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.11■□□□□ 0.81
TBC1D3FA6NER0 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.11■□□□□ 0.81
TBC1D3FA6NER0 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.11■□□□□ 0.81
TBC1D3FA6NER0 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms