Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRIT2A6NDA9 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.2■□□□□ 0.66
LRIT2A6NDA9 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRIT2A6NDA9 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.2■□□□□ 0.66
LRIT2A6NDA9 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRIT2A6NDA9 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRIT2A6NDA9 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
LRIT2A6NDA9 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.2■□□□□ 0.66
LRIT2A6NDA9 ID1-201ENST00000376105 1233 ntBASIC19.2■□□□□ 0.66
LRIT2A6NDA9 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
LRIT2A6NDA9 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.2■□□□□ 0.66
LRIT2A6NDA9 AC142086.2-201ENST00000569753 217 ntBASIC19.2■□□□□ 0.66
LRIT2A6NDA9 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.2■□□□□ 0.66
LRIT2A6NDA9 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRIT2A6NDA9 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRIT2A6NDA9 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRIT2A6NDA9 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
LRIT2A6NDA9 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.19■□□□□ 0.66
LRIT2A6NDA9 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRIT2A6NDA9 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRIT2A6NDA9 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRIT2A6NDA9 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRIT2A6NDA9 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRIT2A6NDA9 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
LRIT2A6NDA9 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRIT2A6NDA9 AC091874.3-201ENST00000512672 1195 ntBASIC19.19■□□□□ 0.66
LRIT2A6NDA9 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.19■□□□□ 0.66
LRIT2A6NDA9 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
LRIT2A6NDA9 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRIT2A6NDA9 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRIT2A6NDA9 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRIT2A6NDA9 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRIT2A6NDA9 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRIT2A6NDA9 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRIT2A6NDA9 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRIT2A6NDA9 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.18■□□□□ 0.66
LRIT2A6NDA9 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
LRIT2A6NDA9 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRIT2A6NDA9 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRIT2A6NDA9 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRIT2A6NDA9 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRIT2A6NDA9 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.18■□□□□ 0.66
LRIT2A6NDA9 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRIT2A6NDA9 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRIT2A6NDA9 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.18■□□□□ 0.66
LRIT2A6NDA9 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRIT2A6NDA9 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRIT2A6NDA9 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.18■□□□□ 0.66
LRIT2A6NDA9 AC073210.2-201ENST00000430369 194 ntBASIC19.18■□□□□ 0.66
LRIT2A6NDA9 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.18■□□□□ 0.66
LRIT2A6NDA9 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.18■□□□□ 0.66
LRIT2A6NDA9 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRIT2A6NDA9 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRIT2A6NDA9 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
LRIT2A6NDA9 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.18■□□□□ 0.66
LRIT2A6NDA9 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
LRIT2A6NDA9 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRIT2A6NDA9 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRIT2A6NDA9 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
LRIT2A6NDA9 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.18■□□□□ 0.66
LRIT2A6NDA9 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.18■□□□□ 0.66
LRIT2A6NDA9 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.18■□□□□ 0.66
LRIT2A6NDA9 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRIT2A6NDA9 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRIT2A6NDA9 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRIT2A6NDA9 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
LRIT2A6NDA9 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.17■□□□□ 0.66
LRIT2A6NDA9 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.17■□□□□ 0.66
LRIT2A6NDA9 MYC-209ENST00000641252 345 ntBASIC19.17■□□□□ 0.66
LRIT2A6NDA9 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRIT2A6NDA9 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
LRIT2A6NDA9 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRIT2A6NDA9 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRIT2A6NDA9 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRIT2A6NDA9 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
LRIT2A6NDA9 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRIT2A6NDA9 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRIT2A6NDA9 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LRIT2A6NDA9 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRIT2A6NDA9 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LRIT2A6NDA9 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRIT2A6NDA9 AC099778.1-201ENST00000568593 1911 ntBASIC19.16■□□□□ 0.66
LRIT2A6NDA9 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.16■□□□□ 0.66
LRIT2A6NDA9 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
LRIT2A6NDA9 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
LRIT2A6NDA9 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.16■□□□□ 0.66
LRIT2A6NDA9 AC098934.4-201ENST00000564127 592 ntBASIC19.16■□□□□ 0.66
LRIT2A6NDA9 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.16■□□□□ 0.66
LRIT2A6NDA9 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRIT2A6NDA9 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.16■□□□□ 0.66
LRIT2A6NDA9 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.16■□□□□ 0.66
LRIT2A6NDA9 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.16■□□□□ 0.66
LRIT2A6NDA9 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRIT2A6NDA9 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRIT2A6NDA9 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRIT2A6NDA9 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.16■□□□□ 0.66
LRIT2A6NDA9 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRIT2A6NDA9 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRIT2A6NDA9 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LRIT2A6NDA9 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms