Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.23■□□□□ 0.19
TRAV3A0A0B4J244 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV3A0A0B4J244 FAM21FP-204ENST00000608637 956 ntBASIC16.23■□□□□ 0.19
TRAV3A0A0B4J244 TFG-210ENST00000620299 1289 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAV3A0A0B4J244 MYCNOS-205ENST00000641950 531 ntBASIC16.23■□□□□ 0.19
TRAV3A0A0B4J244 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV3A0A0B4J244 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TRAV3A0A0B4J244 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV3A0A0B4J244 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV3A0A0B4J244 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAV3A0A0B4J244 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV3A0A0B4J244 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV3A0A0B4J244 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAV3A0A0B4J244 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV3A0A0B4J244 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV3A0A0B4J244 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TRAV3A0A0B4J244 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV3A0A0B4J244 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV3A0A0B4J244 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV3A0A0B4J244 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV3A0A0B4J244 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAV3A0A0B4J244 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV3A0A0B4J244 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV3A0A0B4J244 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV3A0A0B4J244 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV3A0A0B4J244 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV3A0A0B4J244 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TRAV3A0A0B4J244 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC16.22■□□□□ 0.19
TRAV3A0A0B4J244 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV3A0A0B4J244 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
TRAV3A0A0B4J244 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV3A0A0B4J244 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV3A0A0B4J244 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TRAV3A0A0B4J244 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV3A0A0B4J244 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV3A0A0B4J244 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV3A0A0B4J244 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.22■□□□□ 0.19
TRAV3A0A0B4J244 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.22■□□□□ 0.19
TRAV3A0A0B4J244 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV3A0A0B4J244 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAV3A0A0B4J244 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.22■□□□□ 0.19
TRAV3A0A0B4J244 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV3A0A0B4J244 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV3A0A0B4J244 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV3A0A0B4J244 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV3A0A0B4J244 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV3A0A0B4J244 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.21■□□□□ 0.19
TRAV3A0A0B4J244 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV3A0A0B4J244 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV3A0A0B4J244 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.21■□□□□ 0.19
TRAV3A0A0B4J244 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
TRAV3A0A0B4J244 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC16.21■□□□□ 0.19
TRAV3A0A0B4J244 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
TRAV3A0A0B4J244 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC16.21■□□□□ 0.19
TRAV3A0A0B4J244 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TRAV3A0A0B4J244 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV3A0A0B4J244 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV3A0A0B4J244 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAV3A0A0B4J244 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC16.21■□□□□ 0.19
TRAV3A0A0B4J244 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV3A0A0B4J244 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TRAV3A0A0B4J244 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TRAV3A0A0B4J244 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV3A0A0B4J244 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRAV3A0A0B4J244 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
TRAV3A0A0B4J244 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV3A0A0B4J244 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV3A0A0B4J244 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV3A0A0B4J244 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV3A0A0B4J244 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV3A0A0B4J244 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TRAV3A0A0B4J244 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
TRAV3A0A0B4J244 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
TRAV3A0A0B4J244 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TRAV3A0A0B4J244 UQCRFS1P1-201ENST00000435169 820 ntBASIC16.2■□□□□ 0.18
TRAV3A0A0B4J244 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
TRAV3A0A0B4J244 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV3A0A0B4J244 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC16.2■□□□□ 0.18
TRAV3A0A0B4J244 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV3A0A0B4J244 NTF6G-201ENST00000591094 616 ntBASIC16.2■□□□□ 0.18
TRAV3A0A0B4J244 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC16.2■□□□□ 0.18
TRAV3A0A0B4J244 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV3A0A0B4J244 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TRAV3A0A0B4J244 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV3A0A0B4J244 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TRAV3A0A0B4J244 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV3A0A0B4J244 H19-201ENST00000411754 1788 ntTSL 5 BASIC16.2■□□□□ 0.18
TRAV3A0A0B4J244 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV3A0A0B4J244 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC16.2■□□□□ 0.18
TRAV3A0A0B4J244 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV3A0A0B4J244 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV3A0A0B4J244 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.2■□□□□ 0.18
TRAV3A0A0B4J244 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV3A0A0B4J244 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV3A0A0B4J244 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.2■□□□□ 0.18
TRAV3A0A0B4J244 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV3A0A0B4J244 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV3A0A0B4J244 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16.19■□□□□ 0.18
TRAV3A0A0B4J244 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV3A0A0B4J244 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms