Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV27A0A087WT01 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV27A0A087WT01 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
TRAV27A0A087WT01 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.27■□□□□ 0.52
TRAV27A0A087WT01 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV27A0A087WT01 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV27A0A087WT01 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.27■□□□□ 0.52
TRAV27A0A087WT01 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.27■□□□□ 0.52
TRAV27A0A087WT01 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.27■□□□□ 0.52
TRAV27A0A087WT01 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV27A0A087WT01 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV27A0A087WT01 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV27A0A087WT01 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRAV27A0A087WT01 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
TRAV27A0A087WT01 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.26■□□□□ 0.51
TRAV27A0A087WT01 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TRAV27A0A087WT01 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.26■□□□□ 0.51
TRAV27A0A087WT01 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.26■□□□□ 0.51
TRAV27A0A087WT01 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.26■□□□□ 0.51
TRAV27A0A087WT01 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
TRAV27A0A087WT01 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV27A0A087WT01 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV27A0A087WT01 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV27A0A087WT01 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TRAV27A0A087WT01 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV27A0A087WT01 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.26■□□□□ 0.51
TRAV27A0A087WT01 AC097381.1-201ENST00000429019 1296 ntBASIC18.26■□□□□ 0.51
TRAV27A0A087WT01 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.26■□□□□ 0.51
TRAV27A0A087WT01 TERF1P5-201ENST00000477545 1207 ntBASIC18.26■□□□□ 0.51
TRAV27A0A087WT01 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.26■□□□□ 0.51
TRAV27A0A087WT01 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.26■□□□□ 0.51
TRAV27A0A087WT01 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TRAV27A0A087WT01 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV27A0A087WT01 AC010536.3-201ENST00000620306 533 ntBASIC18.26■□□□□ 0.51
TRAV27A0A087WT01 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.26■□□□□ 0.51
TRAV27A0A087WT01 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV27A0A087WT01 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV27A0A087WT01 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
TRAV27A0A087WT01 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV27A0A087WT01 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV27A0A087WT01 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV27A0A087WT01 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV27A0A087WT01 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV27A0A087WT01 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TRAV27A0A087WT01 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV27A0A087WT01 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.26■□□□□ 0.51
TRAV27A0A087WT01 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.26■□□□□ 0.51
TRAV27A0A087WT01 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV27A0A087WT01 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV27A0A087WT01 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV27A0A087WT01 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV27A0A087WT01 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
TRAV27A0A087WT01 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV27A0A087WT01 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV27A0A087WT01 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV27A0A087WT01 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV27A0A087WT01 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV27A0A087WT01 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.25■□□□□ 0.51
TRAV27A0A087WT01 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.25■□□□□ 0.51
TRAV27A0A087WT01 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TRAV27A0A087WT01 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV27A0A087WT01 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.25■□□□□ 0.51
TRAV27A0A087WT01 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.25■□□□□ 0.51
TRAV27A0A087WT01 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV27A0A087WT01 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TRAV27A0A087WT01 AC087623.3-201ENST00000607047 1098 ntBASIC18.25■□□□□ 0.51
TRAV27A0A087WT01 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
TRAV27A0A087WT01 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TRAV27A0A087WT01 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV27A0A087WT01 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV27A0A087WT01 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV27A0A087WT01 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.25■□□□□ 0.51
TRAV27A0A087WT01 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV27A0A087WT01 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.25■□□□□ 0.51
TRAV27A0A087WT01 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV27A0A087WT01 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV27A0A087WT01 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV27A0A087WT01 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
TRAV27A0A087WT01 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV27A0A087WT01 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV27A0A087WT01 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV27A0A087WT01 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV27A0A087WT01 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TRAV27A0A087WT01 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV27A0A087WT01 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV27A0A087WT01 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV27A0A087WT01 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV27A0A087WT01 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV27A0A087WT01 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
TRAV27A0A087WT01 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV27A0A087WT01 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV27A0A087WT01 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV27A0A087WT01 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.24■□□□□ 0.51
TRAV27A0A087WT01 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.24■□□□□ 0.51
TRAV27A0A087WT01 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV27A0A087WT01 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAV27A0A087WT01 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV27A0A087WT01 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TRAV27A0A087WT01 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV27A0A087WT01 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms