Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 ZNF577-201ENST00000301399 3074 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
SNX18Q96RF0 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
SNX18Q96RF0 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC7.35□□□□□ -1.23
SNX18Q96RF0 PVALB-201ENST00000216200 595 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SNX18Q96RF0 FABP1-201ENST00000295834 555 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SNX18Q96RF0 TRAPPC3L-202ENST00000368602 1113 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
SNX18Q96RF0 SNORA14B-201ENST00000384452 135 ntBASIC7.35□□□□□ -1.23
SNX18Q96RF0 MIR595-201ENST00000384905 96 ntBASIC7.35□□□□□ -1.23
SNX18Q96RF0 MT-TS1-201ENST00000387416 69 ntBASIC7.35□□□□□ -1.23
SNX18Q96RF0 MORF4L1P1-201ENST00000404582 967 ntBASIC7.35□□□□□ -1.23
SNX18Q96RF0 LINC01799-201ENST00000411701 386 ntTSL 3 BASIC7.35□□□□□ -1.23
SNX18Q96RF0 AC005999.1-201ENST00000414409 588 ntTSL 4 BASIC7.35□□□□□ -1.23
SNX18Q96RF0 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SNX18Q96RF0 UBE2V2P3-201ENST00000433562 437 ntBASIC7.35□□□□□ -1.23
SNX18Q96RF0 AL772284.1-201ENST00000443421 905 ntBASIC7.35□□□□□ -1.23
SNX18Q96RF0 AL356259.1-201ENST00000443554 1059 ntTSL 5 BASIC7.35□□□□□ -1.23
SNX18Q96RF0 OR4A47-201ENST00000446524 1064 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
SNX18Q96RF0 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC7.35□□□□□ -1.23
SNX18Q96RF0 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
SNX18Q96RF0 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC7.35□□□□□ -1.23
SNX18Q96RF0 RN7SL107P-201ENST00000478127 283 ntBASIC7.35□□□□□ -1.23
SNX18Q96RF0 RN7SL130P-201ENST00000489463 305 ntBASIC7.35□□□□□ -1.23
SNX18Q96RF0 AC114786.3-201ENST00000509304 705 ntBASIC7.35□□□□□ -1.23
SNX18Q96RF0 AC068134.3-201ENST00000513620 788 ntBASIC7.35□□□□□ -1.23
SNX18Q96RF0 AC093297.2-202ENST00000514597 659 ntTSL 3 BASIC7.35□□□□□ -1.23
SNX18Q96RF0 TRIM6-211ENST00000515022 1060 ntTSL 2 BASIC7.35□□□□□ -1.23
SNX18Q96RF0 AP002383.5-201ENST00000542623 1161 ntBASIC7.35□□□□□ -1.23
SNX18Q96RF0 AC078886.1-201ENST00000549144 554 ntBASIC7.35□□□□□ -1.23
SNX18Q96RF0 TMF1P1-201ENST00000576058 373 ntBASIC7.35□□□□□ -1.23
SNX18Q96RF0 RN7SL49P-201ENST00000581392 298 ntBASIC7.35□□□□□ -1.23
SNX18Q96RF0 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC7.35□□□□□ -1.23
SNX18Q96RF0 CD209-211ENST00000602261 939 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SNX18Q96RF0 RBM22P4-201ENST00000613117 1240 ntBASIC7.35□□□□□ -1.23
SNX18Q96RF0 AC027139.2-201ENST00000615639 448 ntBASIC7.35□□□□□ -1.23
SNX18Q96RF0 Metazoa_SRP.146-201ENST00000619409 286 ntBASIC7.35□□□□□ -1.23
SNX18Q96RF0 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC7.35□□□□□ -1.23
SNX18Q96RF0 AL157359.3-201ENST00000623771 217 ntBASIC7.35□□□□□ -1.23
SNX18Q96RF0 SERPINB11-209ENST00000624518 573 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SNX18Q96RF0 RPSAP68-201ENST00000625020 438 ntBASIC7.35□□□□□ -1.23
SNX18Q96RF0 AC108477.1-201ENST00000636764 526 ntTSL 4 BASIC7.35□□□□□ -1.23
SNX18Q96RF0 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SNX18Q96RF0 AC020895.2-201ENST00000624996 1839 ntBASIC7.35□□□□□ -1.23
SNX18Q96RF0 KDELC1P1-201ENST00000512118 1509 ntBASIC7.35□□□□□ -1.23
SNX18Q96RF0 ZKSCAN8-202ENST00000457389 2071 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SNX18Q96RF0 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC7.35□□□□□ -1.23
SNX18Q96RF0 AC092821.2-201ENST00000545710 2042 ntBASIC7.35□□□□□ -1.23
SNX18Q96RF0 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
SNX18Q96RF0 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
SNX18Q96RF0 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC7.35□□□□□ -1.23
SNX18Q96RF0 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC7.35□□□□□ -1.23
SNX18Q96RF0 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SNX18Q96RF0 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SNX18Q96RF0 DNAJC5B-201ENST00000276570 1382 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SNX18Q96RF0 SEPT4-216ENST00000580844 1396 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
SNX18Q96RF0 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.23
SNX18Q96RF0 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SNX18Q96RF0 MATR3-229ENST00000361059 3970 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
SNX18Q96RF0 SNRPB2-201ENST00000246071 2452 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SNX18Q96RF0 CDY1B-202ENST00000382407 2227 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
SNX18Q96RF0 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
SNX18Q96RF0 OR10D3-201ENST00000318666 1030 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
SNX18Q96RF0 RN7SKP25-201ENST00000362449 308 ntBASIC7.34□□□□□ -1.23
SNX18Q96RF0 KRTAP3-3-201ENST00000391586 704 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
SNX18Q96RF0 DSCR4-202ENST00000398948 777 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
SNX18Q96RF0 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC7.34□□□□□ -1.23
SNX18Q96RF0 AC002367.1-201ENST00000416765 405 ntBASIC7.34□□□□□ -1.23
SNX18Q96RF0 FKBP1AP3-201ENST00000423650 319 ntBASIC7.34□□□□□ -1.23
SNX18Q96RF0 WDR82P1-201ENST00000439836 939 ntBASIC7.34□□□□□ -1.23
SNX18Q96RF0 RFC3P1-201ENST00000454568 682 ntBASIC7.34□□□□□ -1.23
SNX18Q96RF0 CHIAP1-201ENST00000456220 995 ntBASIC7.34□□□□□ -1.23
SNX18Q96RF0 AC239859.3-201ENST00000456469 408 ntTSL 5 BASIC7.34□□□□□ -1.23
SNX18Q96RF0 KCNAB1-AS1-201ENST00000467794 456 ntTSL 2 BASIC7.34□□□□□ -1.23
SNX18Q96RF0 AC079795.1-201ENST00000508847 358 ntTSL 3 BASIC7.34□□□□□ -1.23
SNX18Q96RF0 LDHAP1-201ENST00000509421 992 ntBASIC7.34□□□□□ -1.23
SNX18Q96RF0 PDPN-209ENST00000510906 786 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
SNX18Q96RF0 RPS20-204ENST00000519606 424 ntTSL 3 BASIC7.34□□□□□ -1.23
SNX18Q96RF0 IGLV7-35-201ENST00000523314 340 ntBASIC7.34□□□□□ -1.23
SNX18Q96RF0 AC025437.1-201ENST00000523820 346 ntTSL 2 BASIC7.34□□□□□ -1.23
SNX18Q96RF0 AP000879.2-201ENST00000530525 497 ntTSL 3 BASIC7.34□□□□□ -1.23
SNX18Q96RF0 STXBP6-204ENST00000546511 1223 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SNX18Q96RF0 AC073896.2-201ENST00000549565 399 ntTSL 2 BASIC7.34□□□□□ -1.23
SNX18Q96RF0 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC7.34□□□□□ -1.23
SNX18Q96RF0 AC133552.4-201ENST00000576103 676 ntBASIC7.34□□□□□ -1.23
SNX18Q96RF0 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC7.34□□□□□ -1.23
SNX18Q96RF0 AF146191.1-201ENST00000604941 889 ntBASIC7.34□□□□□ -1.23
SNX18Q96RF0 AL161912.3-201ENST00000605404 628 ntBASIC7.34□□□□□ -1.23
SNX18Q96RF0 LINC00837-203ENST00000608061 555 ntTSL 4 BASIC7.34□□□□□ -1.23
SNX18Q96RF0 FAM30B-201ENST00000611556 397 ntBASIC7.34□□□□□ -1.23
SNX18Q96RF0 ZNHIT3-204ENST00000617429 951 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SNX18Q96RF0 AL450226.2-201ENST00000622913 439 ntBASIC7.34□□□□□ -1.23
SNX18Q96RF0 AC012100.3-201ENST00000624738 575 ntBASIC7.34□□□□□ -1.23
SNX18Q96RF0 IPO5-229ENST00000631030 192 ntTSL 5 BASIC7.34□□□□□ -1.23
SNX18Q96RF0 AL583859.2-201ENST00000634462 1127 ntTSL 5 BASIC7.34□□□□□ -1.23
SNX18Q96RF0 RPS20-201ENST00000009589 626 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SNX18Q96RF0 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SNX18Q96RF0 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC7.34□□□□□ -1.23
SNX18Q96RF0 OR2T11-202ENST00000641193 3770 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
SNX18Q96RF0 GNG12-201ENST00000370982 4404 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SNX18Q96RF0 C1GALT1C1-202ENST00000371313 1492 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SNX18Q96RF0 AMZ2-205ENST00000577866 1492 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms