Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 XRCC6P3-201ENST00000422187 1621 ntBASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 CDV3-209ENST00000515421 1305 ntTSL 3 BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 CFAP58-202ENST00000369704 3313 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 CORIN-205ENST00000504584 2417 ntTSL 2 BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 MS4A2-201ENST00000278888 1152 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 RPL12-201ENST00000361436 633 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 RNU1-21P-201ENST00000363327 163 ntBASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 Y_RNA.209-201ENST00000364156 111 ntBASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 CST13P-201ENST00000376992 428 ntBASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 GLRX3P2-201ENST00000405027 1038 ntBASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 RBMS1P1-201ENST00000417216 1156 ntBASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 AC073310.1-201ENST00000423226 1033 ntBASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 MTND2P11-201ENST00000423638 648 ntBASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 OR10J1-201ENST00000423932 1090 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 AL445524.1-205ENST00000425412 392 ntTSL 2 BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 AC245014.1-201ENST00000427732 381 ntTSL 5 BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 AC006450.2-201ENST00000429482 581 ntTSL 2 BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 AC092802.3-201ENST00000434207 420 ntTSL 3 BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 AL021939.1-201ENST00000441868 886 ntBASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 AC074257.1-201ENST00000446340 585 ntTSL 4 BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 AC096543.2-201ENST00000449140 859 ntTSL 3 BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 AL133387.3-201ENST00000450669 522 ntTSL 5 BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 OR2M3-201ENST00000456743 1061 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 RNU6-775P-201ENST00000459318 96 ntBASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 AC117395.3-201ENST00000471176 680 ntTSL 4 BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 SNRPD2P1-201ENST00000489253 354 ntBASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 GNPDA1-212ENST00000513454 980 ntTSL 5 BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 RNU6-751P-201ENST00000516382 101 ntBASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 AC022778.1-201ENST00000518302 545 ntTSL 3 BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 AC021001.1-201ENST00000518703 987 ntBASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 AC091096.1-201ENST00000521955 614 ntTSL 3 BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 CRYAB-203ENST00000525823 915 ntTSL 2 BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 AP000879.2-201ENST00000530525 497 ntTSL 3 BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 TBC1D21-202ENST00000535547 1005 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 PFDN5-211ENST00000550846 392 ntTSL 2 BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 PFDN5-214ENST00000551018 847 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 AC009090.1-201ENST00000562409 358 ntTSL 3 BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 USP2-AS1-205ENST00000578923 895 ntTSL 2 BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 LAMTOR5-AS1-205ENST00000587691 441 ntTSL 3 BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 AC008770.1-206ENST00000589551 523 ntTSL 3 BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 AC010615.2-205ENST00000599993 929 ntTSL 2 BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 RPL23AP90-201ENST00000603820 236 ntBASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 AC244669.1-201ENST00000616141 715 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 CU638689.4-203ENST00000625185 785 ntTSL 5 BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 CTSLP2-202ENST00000626319 1104 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 STK32A-209ENST00000626951 798 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 LINC02034-201ENST00000635368 760 ntTSL 5 BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 TMCC3-203ENST00000551457 4361 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 ZNF300P1-201ENST00000356555 1822 ntBASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 PTER-203ENST00000423462 3212 ntTSL 3 BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 TTC33-201ENST00000337702 2612 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 EHF-201ENST00000257831 3150 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 LINC00501-201ENST00000425388 2046 ntTSL 2 BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 AC103760.1-201ENST00000521326 1486 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 HDAC9-212ENST00000432645 3099 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 TMEM182-203ENST00000412401 3593 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 SLC7A8-206ENST00000469263 3557 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 USP32P1-202ENST00000393005 3846 ntTSL 5 BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 LINC01800-201ENST00000445865 1977 ntTSL 2 BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 PAICS-202ENST00000399688 3297 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 ABLIM1-205ENST00000369266 2230 ntTSL 5 BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 AL353052.2-201ENST00000441459 2241 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 AC020549.1-201ENST00000536916 1440 ntBASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 RAD51B-211ENST00000487861 1673 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 OR9M1P-202ENST00000641564 3163 ntBASIC8.36□□□□□ -1.07
CDK5RAP1Q96SZ6 AC131649.2-201ENST00000624925 4439 ntBASIC8.36□□□□□ -1.07
CDK5RAP1Q96SZ6 DLG2-218ENST00000524982 2872 ntTSL 2 BASIC8.36□□□□□ -1.07
CDK5RAP1Q96SZ6 PTP4A2-218ENST00000602725 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CDK5RAP1Q96SZ6 MAPK10-379ENST00000642013 1385 ntBASIC8.36□□□□□ -1.07
CDK5RAP1Q96SZ6 RAD51B-212ENST00000488612 1550 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CDK5RAP1Q96SZ6 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CDK5RAP1Q96SZ6 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CDK5RAP1Q96SZ6 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CDK5RAP1Q96SZ6 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CDK5RAP1Q96SZ6 ALDOB-201ENST00000374855 2451 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CDK5RAP1Q96SZ6 TCTN1-201ENST00000377654 1539 ntTSL 5 BASIC8.36□□□□□ -1.07
CDK5RAP1Q96SZ6 CLRN1-AS1-202ENST00000476886 2223 ntTSL 2 BASIC8.36□□□□□ -1.07
CDK5RAP1Q96SZ6 EPB41L2-228ENST00000531410 2926 ntTSL 5 BASIC8.36□□□□□ -1.07
CDK5RAP1Q96SZ6 PRAC1-201ENST00000290294 386 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CDK5RAP1Q96SZ6 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC8.36□□□□□ -1.07
CDK5RAP1Q96SZ6 RPL23AP34-201ENST00000423483 410 ntBASIC8.36□□□□□ -1.07
CDK5RAP1Q96SZ6 AC012594.1-235ENST00000424391 727 ntTSL 5 BASIC8.36□□□□□ -1.07
CDK5RAP1Q96SZ6 AL121917.1-202ENST00000424434 367 ntTSL 3 BASIC8.36□□□□□ -1.07
CDK5RAP1Q96SZ6 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC8.36□□□□□ -1.07
CDK5RAP1Q96SZ6 AC007879.1-201ENST00000435643 554 ntTSL 4 BASIC8.36□□□□□ -1.07
CDK5RAP1Q96SZ6 LINC01821-202ENST00000438505 882 ntTSL 4 BASIC8.36□□□□□ -1.07
CDK5RAP1Q96SZ6 AC118653.1-201ENST00000442627 561 ntTSL 3 BASIC8.36□□□□□ -1.07
CDK5RAP1Q96SZ6 CD59-206ENST00000445143 825 ntAPPRIS P2 TSL 3 BASIC8.36□□□□□ -1.07
CDK5RAP1Q96SZ6 ARL2BPP7-201ENST00000446421 490 ntBASIC8.36□□□□□ -1.07
CDK5RAP1Q96SZ6 UBE2V2P4-201ENST00000447495 259 ntBASIC8.36□□□□□ -1.07
CDK5RAP1Q96SZ6 AL591438.2-201ENST00000452635 691 ntBASIC8.36□□□□□ -1.07
CDK5RAP1Q96SZ6 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC8.36□□□□□ -1.07
CDK5RAP1Q96SZ6 MTND2P39-201ENST00000457230 764 ntBASIC8.36□□□□□ -1.07
CDK5RAP1Q96SZ6 RN7SL740P-201ENST00000467060 344 ntBASIC8.36□□□□□ -1.07
CDK5RAP1Q96SZ6 RPL7AP26-201ENST00000488538 813 ntBASIC8.36□□□□□ -1.07
CDK5RAP1Q96SZ6 UGT2B29P-201ENST00000509021 973 ntBASIC8.36□□□□□ -1.07
CDK5RAP1Q96SZ6 RN7SKP14-201ENST00000516000 329 ntBASIC8.36□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms