Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SCN10AQ9Y5Y9 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SCN10AQ9Y5Y9 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SCN10AQ9Y5Y9 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SCN10AQ9Y5Y9 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC22.34■■□□□ 1.17
SCN10AQ9Y5Y9 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
SCN10AQ9Y5Y9 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC22.34■■□□□ 1.17
SCN10AQ9Y5Y9 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SCN10AQ9Y5Y9 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SCN10AQ9Y5Y9 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SCN10AQ9Y5Y9 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC22.34■■□□□ 1.17
SCN10AQ9Y5Y9 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC22.34■■□□□ 1.17
SCN10AQ9Y5Y9 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC22.34■■□□□ 1.17
SCN10AQ9Y5Y9 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC22.34■■□□□ 1.17
SCN10AQ9Y5Y9 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SCN10AQ9Y5Y9 KRT8P9-201ENST00000558927 1449 ntBASIC22.34■■□□□ 1.17
SCN10AQ9Y5Y9 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SCN10AQ9Y5Y9 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SCN10AQ9Y5Y9 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SCN10AQ9Y5Y9 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
SCN10AQ9Y5Y9 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC22.33■■□□□ 1.17
SCN10AQ9Y5Y9 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC22.33■■□□□ 1.17
SCN10AQ9Y5Y9 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC22.33■■□□□ 1.17
SCN10AQ9Y5Y9 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC22.33■■□□□ 1.17
SCN10AQ9Y5Y9 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SCN10AQ9Y5Y9 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
SCN10AQ9Y5Y9 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
SCN10AQ9Y5Y9 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
SCN10AQ9Y5Y9 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
SCN10AQ9Y5Y9 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
SCN10AQ9Y5Y9 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SCN10AQ9Y5Y9 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SCN10AQ9Y5Y9 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SCN10AQ9Y5Y9 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC22.32■■□□□ 1.16
SCN10AQ9Y5Y9 REXO1L10P-201ENST00000615707 1290 ntBASIC22.32■■□□□ 1.16
SCN10AQ9Y5Y9 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
SCN10AQ9Y5Y9 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SCN10AQ9Y5Y9 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC22.32■■□□□ 1.16
SCN10AQ9Y5Y9 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
SCN10AQ9Y5Y9 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
SCN10AQ9Y5Y9 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
SCN10AQ9Y5Y9 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC22.32■■□□□ 1.16
SCN10AQ9Y5Y9 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC22.32■■□□□ 1.16
SCN10AQ9Y5Y9 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC22.32■■□□□ 1.16
SCN10AQ9Y5Y9 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SCN10AQ9Y5Y9 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
SCN10AQ9Y5Y9 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SCN10AQ9Y5Y9 F2R-202ENST00000505600 442 ntTSL 2 BASIC22.31■■□□□ 1.16
SCN10AQ9Y5Y9 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC22.31■■□□□ 1.16
SCN10AQ9Y5Y9 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SCN10AQ9Y5Y9 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SCN10AQ9Y5Y9 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SCN10AQ9Y5Y9 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SCN10AQ9Y5Y9 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SCN10AQ9Y5Y9 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
SCN10AQ9Y5Y9 FDX2-207ENST00000494368 584 ntTSL 4 BASIC22.3■■□□□ 1.16
SCN10AQ9Y5Y9 PNN-205ENST00000556530 601 ntTSL 2 BASIC22.3■■□□□ 1.16
SCN10AQ9Y5Y9 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SCN10AQ9Y5Y9 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC22.3■■□□□ 1.16
SCN10AQ9Y5Y9 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SCN10AQ9Y5Y9 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.3■■□□□ 1.16
SCN10AQ9Y5Y9 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC22.3■■□□□ 1.16
SCN10AQ9Y5Y9 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
SCN10AQ9Y5Y9 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SCN10AQ9Y5Y9 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SCN10AQ9Y5Y9 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC22.3■■□□□ 1.16
SCN10AQ9Y5Y9 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SCN10AQ9Y5Y9 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
SCN10AQ9Y5Y9 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SCN10AQ9Y5Y9 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SCN10AQ9Y5Y9 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
SCN10AQ9Y5Y9 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC22.29■■□□□ 1.16
SCN10AQ9Y5Y9 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC22.29■■□□□ 1.16
SCN10AQ9Y5Y9 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
SCN10AQ9Y5Y9 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC22.29■■□□□ 1.16
SCN10AQ9Y5Y9 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC22.29■■□□□ 1.16
SCN10AQ9Y5Y9 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SCN10AQ9Y5Y9 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SCN10AQ9Y5Y9 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
SCN10AQ9Y5Y9 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC22.29■■□□□ 1.16
SCN10AQ9Y5Y9 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SCN10AQ9Y5Y9 FAM197Y1-201ENST00000421178 764 ntBASIC22.29■■□□□ 1.16
SCN10AQ9Y5Y9 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC22.29■■□□□ 1.16
SCN10AQ9Y5Y9 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC22.29■■□□□ 1.16
SCN10AQ9Y5Y9 TK2-213ENST00000563369 882 ntTSL 5 BASIC22.29■■□□□ 1.16
SCN10AQ9Y5Y9 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC22.29■■□□□ 1.16
SCN10AQ9Y5Y9 MIR6786-201ENST00000616843 113 ntBASIC22.29■■□□□ 1.16
SCN10AQ9Y5Y9 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC22.28■■□□□ 1.16
SCN10AQ9Y5Y9 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SCN10AQ9Y5Y9 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC22.28■■□□□ 1.16
SCN10AQ9Y5Y9 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC22.28■■□□□ 1.16
SCN10AQ9Y5Y9 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC22.28■■□□□ 1.16
SCN10AQ9Y5Y9 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SCN10AQ9Y5Y9 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.28■■□□□ 1.16
SCN10AQ9Y5Y9 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC22.28■■□□□ 1.16
SCN10AQ9Y5Y9 P4HB-223ENST00000576390 439 ntTSL 4 BASIC22.28■■□□□ 1.16
SCN10AQ9Y5Y9 AC073195.1-201ENST00000607241 877 ntBASIC22.28■■□□□ 1.16
SCN10AQ9Y5Y9 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SCN10AQ9Y5Y9 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
SCN10AQ9Y5Y9 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms