Protein–RNA interactions for Protein: Q9Y5F6

PCDHGC5, Protocadherin gamma-C5, humanhuman

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC5Q9Y5F6 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC22.23■■□□□ 1.15
PCDHGC5Q9Y5F6 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGC5Q9Y5F6 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGC5Q9Y5F6 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDHGC5Q9Y5F6 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC22.23■■□□□ 1.15
PCDHGC5Q9Y5F6 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGC5Q9Y5F6 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC22.23■■□□□ 1.15
PCDHGC5Q9Y5F6 AC073314.1-201ENST00000568729 2216 ntBASIC22.23■■□□□ 1.15
PCDHGC5Q9Y5F6 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC22.23■■□□□ 1.15
PCDHGC5Q9Y5F6 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC22.23■■□□□ 1.15
PCDHGC5Q9Y5F6 ERF-202ENST00000440177 2032 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDHGC5Q9Y5F6 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC22.22■■□□□ 1.15
PCDHGC5Q9Y5F6 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHGC5Q9Y5F6 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHGC5Q9Y5F6 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHGC5Q9Y5F6 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC22.22■■□□□ 1.15
PCDHGC5Q9Y5F6 AC060766.5-201ENST00000590539 871 ntBASIC22.22■■□□□ 1.15
PCDHGC5Q9Y5F6 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHGC5Q9Y5F6 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC22.22■■□□□ 1.15
PCDHGC5Q9Y5F6 PKD1P6-201ENST00000343738 4769 ntBASIC22.22■■□□□ 1.15
PCDHGC5Q9Y5F6 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHGC5Q9Y5F6 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGC5Q9Y5F6 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGC5Q9Y5F6 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC22.21■■□□□ 1.15
PCDHGC5Q9Y5F6 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC22.21■■□□□ 1.15
PCDHGC5Q9Y5F6 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
PCDHGC5Q9Y5F6 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGC5Q9Y5F6 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
PCDHGC5Q9Y5F6 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
PCDHGC5Q9Y5F6 UBE2SP1-201ENST00000450587 669 ntBASIC22.21■■□□□ 1.15
PCDHGC5Q9Y5F6 C1QBPP2-201ENST00000528754 825 ntBASIC22.21■■□□□ 1.15
PCDHGC5Q9Y5F6 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC22.21■■□□□ 1.15
PCDHGC5Q9Y5F6 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGC5Q9Y5F6 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGC5Q9Y5F6 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGC5Q9Y5F6 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGC5Q9Y5F6 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
PCDHGC5Q9Y5F6 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
PCDHGC5Q9Y5F6 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGC5Q9Y5F6 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGC5Q9Y5F6 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC22.21■■□□□ 1.15
PCDHGC5Q9Y5F6 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC22.21■■□□□ 1.15
PCDHGC5Q9Y5F6 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
PCDHGC5Q9Y5F6 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHGC5Q9Y5F6 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHGC5Q9Y5F6 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
PCDHGC5Q9Y5F6 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHGC5Q9Y5F6 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
PCDHGC5Q9Y5F6 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHGC5Q9Y5F6 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHGC5Q9Y5F6 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC22.2■■□□□ 1.14
PCDHGC5Q9Y5F6 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHGC5Q9Y5F6 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC22.2■■□□□ 1.14
PCDHGC5Q9Y5F6 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC22.2■■□□□ 1.14
PCDHGC5Q9Y5F6 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHGC5Q9Y5F6 RPPH1-201ENST00000516869 333 ntBASIC22.2■■□□□ 1.14
PCDHGC5Q9Y5F6 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHGC5Q9Y5F6 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHGC5Q9Y5F6 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC22.2■■□□□ 1.14
PCDHGC5Q9Y5F6 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHGC5Q9Y5F6 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHGC5Q9Y5F6 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC22.2■■□□□ 1.14
PCDHGC5Q9Y5F6 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHGC5Q9Y5F6 RNF165-205ENST00000588679 2904 ntBASIC22.2■■□□□ 1.14
PCDHGC5Q9Y5F6 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
PCDHGC5Q9Y5F6 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
PCDHGC5Q9Y5F6 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGC5Q9Y5F6 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC22.19■■□□□ 1.14
PCDHGC5Q9Y5F6 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
PCDHGC5Q9Y5F6 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC22.19■■□□□ 1.14
PCDHGC5Q9Y5F6 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGC5Q9Y5F6 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC22.19■■□□□ 1.14
PCDHGC5Q9Y5F6 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC22.19■■□□□ 1.14
PCDHGC5Q9Y5F6 FAM21FP-204ENST00000608637 956 ntBASIC22.19■■□□□ 1.14
PCDHGC5Q9Y5F6 HLA-B-256ENST00000639848 1089 ntBASIC22.19■■□□□ 1.14
PCDHGC5Q9Y5F6 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.19■■□□□ 1.14
PCDHGC5Q9Y5F6 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
PCDHGC5Q9Y5F6 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
PCDHGC5Q9Y5F6 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGC5Q9Y5F6 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
PCDHGC5Q9Y5F6 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC22.19■■□□□ 1.14
PCDHGC5Q9Y5F6 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
PCDHGC5Q9Y5F6 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGC5Q9Y5F6 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHGC5Q9Y5F6 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHGC5Q9Y5F6 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHGC5Q9Y5F6 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHGC5Q9Y5F6 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHGC5Q9Y5F6 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC22.18■■□□□ 1.14
PCDHGC5Q9Y5F6 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC22.18■■□□□ 1.14
PCDHGC5Q9Y5F6 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC22.18■■□□□ 1.14
PCDHGC5Q9Y5F6 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC22.18■■□□□ 1.14
PCDHGC5Q9Y5F6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC22.18■■□□□ 1.14
PCDHGC5Q9Y5F6 FAM197Y4-202ENST00000622692 608 ntBASIC22.18■■□□□ 1.14
PCDHGC5Q9Y5F6 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC22.18■■□□□ 1.14
PCDHGC5Q9Y5F6 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHGC5Q9Y5F6 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC22.17■■□□□ 1.14
PCDHGC5Q9Y5F6 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHGC5Q9Y5F6 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
PCDHGC5Q9Y5F6 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms