Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MRPS28Q9Y2Q9 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MRPS28Q9Y2Q9 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
MRPS28Q9Y2Q9 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MRPS28Q9Y2Q9 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
MRPS28Q9Y2Q9 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MRPS28Q9Y2Q9 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
MRPS28Q9Y2Q9 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.37■□□□□ 0.37
MRPS28Q9Y2Q9 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.37■□□□□ 0.37
MRPS28Q9Y2Q9 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.37■□□□□ 0.37
MRPS28Q9Y2Q9 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.37■□□□□ 0.37
MRPS28Q9Y2Q9 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.37■□□□□ 0.37
MRPS28Q9Y2Q9 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
MRPS28Q9Y2Q9 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MRPS28Q9Y2Q9 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.37■□□□□ 0.37
MRPS28Q9Y2Q9 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MRPS28Q9Y2Q9 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.36■□□□□ 0.37
MRPS28Q9Y2Q9 DPP3P2-201ENST00000416030 1696 ntBASIC17.36■□□□□ 0.37
MRPS28Q9Y2Q9 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MRPS28Q9Y2Q9 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
MRPS28Q9Y2Q9 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.36■□□□□ 0.37
MRPS28Q9Y2Q9 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.36■□□□□ 0.37
MRPS28Q9Y2Q9 CCDC92B-201ENST00000575506 885 ntBASIC17.36■□□□□ 0.37
MRPS28Q9Y2Q9 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MRPS28Q9Y2Q9 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.36■□□□□ 0.37
MRPS28Q9Y2Q9 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.36■□□□□ 0.37
MRPS28Q9Y2Q9 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.36■□□□□ 0.37
MRPS28Q9Y2Q9 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MRPS28Q9Y2Q9 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
MRPS28Q9Y2Q9 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
MRPS28Q9Y2Q9 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
MRPS28Q9Y2Q9 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MRPS28Q9Y2Q9 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MRPS28Q9Y2Q9 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MRPS28Q9Y2Q9 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
MRPS28Q9Y2Q9 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.35■□□□□ 0.37
MRPS28Q9Y2Q9 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MRPS28Q9Y2Q9 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MRPS28Q9Y2Q9 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MRPS28Q9Y2Q9 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MRPS28Q9Y2Q9 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.35■□□□□ 0.37
MRPS28Q9Y2Q9 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MRPS28Q9Y2Q9 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
MRPS28Q9Y2Q9 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MRPS28Q9Y2Q9 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
MRPS28Q9Y2Q9 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MRPS28Q9Y2Q9 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.35■□□□□ 0.37
MRPS28Q9Y2Q9 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MRPS28Q9Y2Q9 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.35■□□□□ 0.37
MRPS28Q9Y2Q9 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.35■□□□□ 0.37
MRPS28Q9Y2Q9 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.35■□□□□ 0.37
MRPS28Q9Y2Q9 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
MRPS28Q9Y2Q9 KRT8P36-201ENST00000489121 1440 ntBASIC17.35■□□□□ 0.37
MRPS28Q9Y2Q9 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MRPS28Q9Y2Q9 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MRPS28Q9Y2Q9 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.35■□□□□ 0.37
MRPS28Q9Y2Q9 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MRPS28Q9Y2Q9 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.35■□□□□ 0.37
MRPS28Q9Y2Q9 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MRPS28Q9Y2Q9 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MRPS28Q9Y2Q9 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MRPS28Q9Y2Q9 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
MRPS28Q9Y2Q9 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.34■□□□□ 0.37
MRPS28Q9Y2Q9 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MRPS28Q9Y2Q9 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MRPS28Q9Y2Q9 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
MRPS28Q9Y2Q9 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MRPS28Q9Y2Q9 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MRPS28Q9Y2Q9 AC091799.1-201ENST00000422823 811 ntBASIC17.34■□□□□ 0.37
MRPS28Q9Y2Q9 AC007322.3-201ENST00000426526 701 ntBASIC17.34■□□□□ 0.37
MRPS28Q9Y2Q9 AC105265.2-201ENST00000467189 838 ntBASIC17.34■□□□□ 0.37
MRPS28Q9Y2Q9 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.34■□□□□ 0.37
MRPS28Q9Y2Q9 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
MRPS28Q9Y2Q9 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MRPS28Q9Y2Q9 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.34■□□□□ 0.37
MRPS28Q9Y2Q9 KRT18P20-201ENST00000548986 1279 ntBASIC17.34■□□□□ 0.37
MRPS28Q9Y2Q9 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.34■□□□□ 0.37
MRPS28Q9Y2Q9 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.34■□□□□ 0.37
MRPS28Q9Y2Q9 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
MRPS28Q9Y2Q9 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
MRPS28Q9Y2Q9 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.33■□□□□ 0.37
MRPS28Q9Y2Q9 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MRPS28Q9Y2Q9 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
MRPS28Q9Y2Q9 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
MRPS28Q9Y2Q9 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MRPS28Q9Y2Q9 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
MRPS28Q9Y2Q9 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
MRPS28Q9Y2Q9 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
MRPS28Q9Y2Q9 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
MRPS28Q9Y2Q9 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
MRPS28Q9Y2Q9 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.33■□□□□ 0.36
MRPS28Q9Y2Q9 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MRPS28Q9Y2Q9 FAM21FP-204ENST00000608637 956 ntBASIC17.33■□□□□ 0.36
MRPS28Q9Y2Q9 AC243732.1-201ENST00000612648 864 ntBASIC17.33■□□□□ 0.36
MRPS28Q9Y2Q9 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
MRPS28Q9Y2Q9 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
MRPS28Q9Y2Q9 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
MRPS28Q9Y2Q9 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MRPS28Q9Y2Q9 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.33■□□□□ 0.36
MRPS28Q9Y2Q9 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms