Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.74■□□□□ 0.75
SATB2Q9UPW6 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.74■□□□□ 0.75
SATB2Q9UPW6 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.74■□□□□ 0.75
SATB2Q9UPW6 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.74■□□□□ 0.75
SATB2Q9UPW6 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SATB2Q9UPW6 Z98882.1-201ENST00000622160 2253 ntBASIC19.74■□□□□ 0.75
SATB2Q9UPW6 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SATB2Q9UPW6 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
SATB2Q9UPW6 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.74■□□□□ 0.75
SATB2Q9UPW6 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SATB2Q9UPW6 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.73■□□□□ 0.75
SATB2Q9UPW6 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
SATB2Q9UPW6 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SATB2Q9UPW6 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
SATB2Q9UPW6 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SATB2Q9UPW6 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SATB2Q9UPW6 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SATB2Q9UPW6 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SATB2Q9UPW6 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.73■□□□□ 0.75
SATB2Q9UPW6 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SATB2Q9UPW6 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.73■□□□□ 0.75
SATB2Q9UPW6 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
SATB2Q9UPW6 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SATB2Q9UPW6 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.73■□□□□ 0.75
SATB2Q9UPW6 AC026310.3-201ENST00000625186 2373 ntBASIC19.73■□□□□ 0.75
SATB2Q9UPW6 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
SATB2Q9UPW6 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SATB2Q9UPW6 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.73■□□□□ 0.75
SATB2Q9UPW6 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SATB2Q9UPW6 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.72■□□□□ 0.75
SATB2Q9UPW6 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SATB2Q9UPW6 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SATB2Q9UPW6 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SATB2Q9UPW6 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SATB2Q9UPW6 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SATB2Q9UPW6 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.72■□□□□ 0.75
SATB2Q9UPW6 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SATB2Q9UPW6 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.72■□□□□ 0.75
SATB2Q9UPW6 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SATB2Q9UPW6 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
SATB2Q9UPW6 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SATB2Q9UPW6 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.72■□□□□ 0.75
SATB2Q9UPW6 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.72■□□□□ 0.75
SATB2Q9UPW6 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SATB2Q9UPW6 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.72■□□□□ 0.75
SATB2Q9UPW6 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SATB2Q9UPW6 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SATB2Q9UPW6 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SATB2Q9UPW6 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.71■□□□□ 0.75
SATB2Q9UPW6 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.71■□□□□ 0.75
SATB2Q9UPW6 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SATB2Q9UPW6 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
SATB2Q9UPW6 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SATB2Q9UPW6 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SATB2Q9UPW6 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SATB2Q9UPW6 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SATB2Q9UPW6 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SATB2Q9UPW6 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SATB2Q9UPW6 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SATB2Q9UPW6 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SATB2Q9UPW6 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.71■□□□□ 0.75
SATB2Q9UPW6 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SATB2Q9UPW6 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SATB2Q9UPW6 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.71■□□□□ 0.75
SATB2Q9UPW6 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SATB2Q9UPW6 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SATB2Q9UPW6 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.71■□□□□ 0.75
SATB2Q9UPW6 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SATB2Q9UPW6 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SATB2Q9UPW6 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SATB2Q9UPW6 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SATB2Q9UPW6 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SATB2Q9UPW6 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SATB2Q9UPW6 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SATB2Q9UPW6 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.7■□□□□ 0.74
SATB2Q9UPW6 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SATB2Q9UPW6 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SATB2Q9UPW6 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SATB2Q9UPW6 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SATB2Q9UPW6 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.7■□□□□ 0.74
SATB2Q9UPW6 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SATB2Q9UPW6 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.7■□□□□ 0.74
SATB2Q9UPW6 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.7■□□□□ 0.74
SATB2Q9UPW6 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SATB2Q9UPW6 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SATB2Q9UPW6 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.7■□□□□ 0.74
SATB2Q9UPW6 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.7■□□□□ 0.74
SATB2Q9UPW6 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.7■□□□□ 0.74
SATB2Q9UPW6 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.7■□□□□ 0.74
SATB2Q9UPW6 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SATB2Q9UPW6 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SATB2Q9UPW6 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.69■□□□□ 0.74
SATB2Q9UPW6 CYP21A1P-202ENST00000354927 1481 ntBASIC19.69■□□□□ 0.74
SATB2Q9UPW6 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SATB2Q9UPW6 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SATB2Q9UPW6 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SATB2Q9UPW6 POM121L13P-201ENST00000422362 380 ntBASIC19.69■□□□□ 0.74
SATB2Q9UPW6 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.69■□□□□ 0.74
SATB2Q9UPW6 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SATB2Q9UPW6 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms