Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AL356652.1-201ENST00000615962 565 ntBASIC21.03■□□□□ 0.96
PPARGC1AQ9UBK2 AL589743.5-201ENST00000616611 1050 ntBASIC21.03■□□□□ 0.96
PPARGC1AQ9UBK2 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.03■□□□□ 0.96
PPARGC1AQ9UBK2 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
PPARGC1AQ9UBK2 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PPARGC1AQ9UBK2 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PPARGC1AQ9UBK2 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PPARGC1AQ9UBK2 KRT8P36-201ENST00000489121 1440 ntBASIC21.03■□□□□ 0.96
PPARGC1AQ9UBK2 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PPARGC1AQ9UBK2 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PPARGC1AQ9UBK2 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
PPARGC1AQ9UBK2 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PPARGC1AQ9UBK2 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.02■□□□□ 0.96
PPARGC1AQ9UBK2 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.02■□□□□ 0.96
PPARGC1AQ9UBK2 AC092118.2-201ENST00000613495 667 ntBASIC21.02■□□□□ 0.96
PPARGC1AQ9UBK2 AC105020.6-201ENST00000621523 1217 ntBASIC21.02■□□□□ 0.96
PPARGC1AQ9UBK2 KRT17P1-201ENST00000399211 1546 ntBASIC21.02■□□□□ 0.96
PPARGC1AQ9UBK2 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PPARGC1AQ9UBK2 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PPARGC1AQ9UBK2 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PPARGC1AQ9UBK2 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
PPARGC1AQ9UBK2 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
PPARGC1AQ9UBK2 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PPARGC1AQ9UBK2 AC007225.1-201ENST00000566331 1836 ntBASIC21.01■□□□□ 0.95
PPARGC1AQ9UBK2 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
PPARGC1AQ9UBK2 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PPARGC1AQ9UBK2 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
PPARGC1AQ9UBK2 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PPARGC1AQ9UBK2 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.01■□□□□ 0.95
PPARGC1AQ9UBK2 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PPARGC1AQ9UBK2 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PPARGC1AQ9UBK2 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
PPARGC1AQ9UBK2 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PPARGC1AQ9UBK2 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PPARGC1AQ9UBK2 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.01■□□□□ 0.95
PPARGC1AQ9UBK2 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
PPARGC1AQ9UBK2 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
PPARGC1AQ9UBK2 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
PPARGC1AQ9UBK2 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.01■□□□□ 0.95
PPARGC1AQ9UBK2 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PPARGC1AQ9UBK2 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.01■□□□□ 0.95
PPARGC1AQ9UBK2 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.01■□□□□ 0.95
PPARGC1AQ9UBK2 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
PPARGC1AQ9UBK2 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PPARGC1AQ9UBK2 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.01■□□□□ 0.95
PPARGC1AQ9UBK2 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PPARGC1AQ9UBK2 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21■□□□□ 0.95
PPARGC1AQ9UBK2 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PPARGC1AQ9UBK2 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PPARGC1AQ9UBK2 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PPARGC1AQ9UBK2 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21■□□□□ 0.95
PPARGC1AQ9UBK2 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21■□□□□ 0.95
PPARGC1AQ9UBK2 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21■□□□□ 0.95
PPARGC1AQ9UBK2 LSM12P1-201ENST00000411836 588 ntBASIC21■□□□□ 0.95
PPARGC1AQ9UBK2 AC073210.2-201ENST00000430369 194 ntBASIC21■□□□□ 0.95
PPARGC1AQ9UBK2 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21■□□□□ 0.95
PPARGC1AQ9UBK2 MIR4758-201ENST00000577688 71 ntBASIC21■□□□□ 0.95
PPARGC1AQ9UBK2 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PPARGC1AQ9UBK2 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
PPARGC1AQ9UBK2 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21■□□□□ 0.95
PPARGC1AQ9UBK2 LINC01006-201ENST00000333319 2292 ntBASIC21■□□□□ 0.95
PPARGC1AQ9UBK2 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
PPARGC1AQ9UBK2 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21■□□□□ 0.95
PPARGC1AQ9UBK2 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
PPARGC1AQ9UBK2 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PPARGC1AQ9UBK2 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PPARGC1AQ9UBK2 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
PPARGC1AQ9UBK2 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PPARGC1AQ9UBK2 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PPARGC1AQ9UBK2 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.99■□□□□ 0.95
PPARGC1AQ9UBK2 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PPARGC1AQ9UBK2 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
PPARGC1AQ9UBK2 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.99■□□□□ 0.95
PPARGC1AQ9UBK2 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PPARGC1AQ9UBK2 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.99■□□□□ 0.95
PPARGC1AQ9UBK2 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PPARGC1AQ9UBK2 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.99■□□□□ 0.95
PPARGC1AQ9UBK2 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
PPARGC1AQ9UBK2 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.99■□□□□ 0.95
PPARGC1AQ9UBK2 AL138781.1-201ENST00000566567 1274 ntBASIC20.99■□□□□ 0.95
PPARGC1AQ9UBK2 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.99■□□□□ 0.95
PPARGC1AQ9UBK2 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
PPARGC1AQ9UBK2 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PPARGC1AQ9UBK2 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PPARGC1AQ9UBK2 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
PPARGC1AQ9UBK2 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PPARGC1AQ9UBK2 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PPARGC1AQ9UBK2 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PPARGC1AQ9UBK2 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
PPARGC1AQ9UBK2 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
PPARGC1AQ9UBK2 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
PPARGC1AQ9UBK2 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.98■□□□□ 0.95
PPARGC1AQ9UBK2 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.98■□□□□ 0.95
PPARGC1AQ9UBK2 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.98■□□□□ 0.95
PPARGC1AQ9UBK2 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.98■□□□□ 0.95
PPARGC1AQ9UBK2 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PPARGC1AQ9UBK2 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PPARGC1AQ9UBK2 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PPARGC1AQ9UBK2 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
PPARGC1AQ9UBK2 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms