Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.01■□□□□ 0.47
CLCF1Q9UBD9 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLCF1Q9UBD9 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLCF1Q9UBD9 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.01■□□□□ 0.47
CLCF1Q9UBD9 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCF1Q9UBD9 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.01■□□□□ 0.47
CLCF1Q9UBD9 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLCF1Q9UBD9 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLCF1Q9UBD9 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCF1Q9UBD9 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.01■□□□□ 0.47
CLCF1Q9UBD9 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCF1Q9UBD9 AL390719.1-204ENST00000412397 1219 ntBASIC18.01■□□□□ 0.47
CLCF1Q9UBD9 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
CLCF1Q9UBD9 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCF1Q9UBD9 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.01■□□□□ 0.47
CLCF1Q9UBD9 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.01■□□□□ 0.47
CLCF1Q9UBD9 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.01■□□□□ 0.47
CLCF1Q9UBD9 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLCF1Q9UBD9 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.01■□□□□ 0.47
CLCF1Q9UBD9 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLCF1Q9UBD9 AC006557.6-201ENST00000623071 864 ntBASIC18.01■□□□□ 0.47
CLCF1Q9UBD9 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCF1Q9UBD9 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.01■□□□□ 0.47
CLCF1Q9UBD9 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.01■□□□□ 0.47
CLCF1Q9UBD9 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCF1Q9UBD9 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCF1Q9UBD9 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCF1Q9UBD9 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCF1Q9UBD9 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLCF1Q9UBD9 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18■□□□□ 0.47
CLCF1Q9UBD9 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18■□□□□ 0.47
CLCF1Q9UBD9 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLCF1Q9UBD9 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CLCF1Q9UBD9 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLCF1Q9UBD9 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18■□□□□ 0.47
CLCF1Q9UBD9 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLCF1Q9UBD9 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18■□□□□ 0.47
CLCF1Q9UBD9 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18■□□□□ 0.47
CLCF1Q9UBD9 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CLCF1Q9UBD9 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18■□□□□ 0.47
CLCF1Q9UBD9 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18■□□□□ 0.47
CLCF1Q9UBD9 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18■□□□□ 0.47
CLCF1Q9UBD9 AL158047.1-201ENST00000445918 881 ntBASIC18■□□□□ 0.47
CLCF1Q9UBD9 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18■□□□□ 0.47
CLCF1Q9UBD9 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
CLCF1Q9UBD9 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18■□□□□ 0.47
CLCF1Q9UBD9 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CLCF1Q9UBD9 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18■□□□□ 0.47
CLCF1Q9UBD9 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18■□□□□ 0.47
CLCF1Q9UBD9 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18■□□□□ 0.47
CLCF1Q9UBD9 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLCF1Q9UBD9 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18■□□□□ 0.47
CLCF1Q9UBD9 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLCF1Q9UBD9 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CLCF1Q9UBD9 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CLCF1Q9UBD9 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLCF1Q9UBD9 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLCF1Q9UBD9 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLCF1Q9UBD9 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLCF1Q9UBD9 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCF1Q9UBD9 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCF1Q9UBD9 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.99■□□□□ 0.47
CLCF1Q9UBD9 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
CLCF1Q9UBD9 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCF1Q9UBD9 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.99■□□□□ 0.47
CLCF1Q9UBD9 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLCF1Q9UBD9 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
CLCF1Q9UBD9 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.99■□□□□ 0.47
CLCF1Q9UBD9 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.99■□□□□ 0.47
CLCF1Q9UBD9 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.99■□□□□ 0.47
CLCF1Q9UBD9 AC093827.2-201ENST00000512654 315 ntBASIC17.99■□□□□ 0.47
CLCF1Q9UBD9 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCF1Q9UBD9 AC023632.3-201ENST00000521633 145 ntBASIC17.99■□□□□ 0.47
CLCF1Q9UBD9 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.99■□□□□ 0.47
CLCF1Q9UBD9 AC120498.8-201ENST00000614275 531 ntBASIC17.99■□□□□ 0.47
CLCF1Q9UBD9 AL359736.2-201ENST00000621992 437 ntBASIC17.99■□□□□ 0.47
CLCF1Q9UBD9 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCF1Q9UBD9 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLCF1Q9UBD9 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCF1Q9UBD9 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCF1Q9UBD9 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCF1Q9UBD9 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.98■□□□□ 0.47
CLCF1Q9UBD9 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCF1Q9UBD9 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
CLCF1Q9UBD9 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.98■□□□□ 0.47
CLCF1Q9UBD9 RN7SL471P-201ENST00000580476 299 ntBASIC17.98■□□□□ 0.47
CLCF1Q9UBD9 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCF1Q9UBD9 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.98■□□□□ 0.47
CLCF1Q9UBD9 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLCF1Q9UBD9 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.98■□□□□ 0.47
CLCF1Q9UBD9 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.98■□□□□ 0.47
CLCF1Q9UBD9 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCF1Q9UBD9 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCF1Q9UBD9 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCF1Q9UBD9 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCF1Q9UBD9 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCF1Q9UBD9 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.98■□□□□ 0.47
CLCF1Q9UBD9 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLCF1Q9UBD9 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCF1Q9UBD9 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms