Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SPHK1Q9NYA1 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.49■□□□□ 0.71
SPHK1Q9NYA1 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SPHK1Q9NYA1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.49■□□□□ 0.71
SPHK1Q9NYA1 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.49■□□□□ 0.71
SPHK1Q9NYA1 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.48■□□□□ 0.71
SPHK1Q9NYA1 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SPHK1Q9NYA1 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SPHK1Q9NYA1 ABHD17AP1-201ENST00000358206 933 ntBASIC19.48■□□□□ 0.71
SPHK1Q9NYA1 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.48■□□□□ 0.71
SPHK1Q9NYA1 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.48■□□□□ 0.71
SPHK1Q9NYA1 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.48■□□□□ 0.71
SPHK1Q9NYA1 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.48■□□□□ 0.71
SPHK1Q9NYA1 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
SPHK1Q9NYA1 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SPHK1Q9NYA1 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SPHK1Q9NYA1 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SPHK1Q9NYA1 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SPHK1Q9NYA1 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SPHK1Q9NYA1 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SPHK1Q9NYA1 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.48■□□□□ 0.71
SPHK1Q9NYA1 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SPHK1Q9NYA1 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SPHK1Q9NYA1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.48■□□□□ 0.71
SPHK1Q9NYA1 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SPHK1Q9NYA1 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
SPHK1Q9NYA1 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SPHK1Q9NYA1 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SPHK1Q9NYA1 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SPHK1Q9NYA1 AC092720.2-201ENST00000602388 1665 ntBASIC19.47■□□□□ 0.71
SPHK1Q9NYA1 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.47■□□□□ 0.71
SPHK1Q9NYA1 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.47■□□□□ 0.71
SPHK1Q9NYA1 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SPHK1Q9NYA1 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
SPHK1Q9NYA1 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.47■□□□□ 0.71
SPHK1Q9NYA1 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SPHK1Q9NYA1 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.47■□□□□ 0.71
SPHK1Q9NYA1 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SPHK1Q9NYA1 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SPHK1Q9NYA1 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.47■□□□□ 0.71
SPHK1Q9NYA1 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SPHK1Q9NYA1 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SPHK1Q9NYA1 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
SPHK1Q9NYA1 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SPHK1Q9NYA1 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.46■□□□□ 0.71
SPHK1Q9NYA1 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPHK1Q9NYA1 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPHK1Q9NYA1 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPHK1Q9NYA1 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SPHK1Q9NYA1 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.46■□□□□ 0.71
SPHK1Q9NYA1 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.46■□□□□ 0.71
SPHK1Q9NYA1 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.46■□□□□ 0.71
SPHK1Q9NYA1 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.46■□□□□ 0.71
SPHK1Q9NYA1 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.46■□□□□ 0.71
SPHK1Q9NYA1 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SPHK1Q9NYA1 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SPHK1Q9NYA1 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SPHK1Q9NYA1 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SPHK1Q9NYA1 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.46■□□□□ 0.71
SPHK1Q9NYA1 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPHK1Q9NYA1 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPHK1Q9NYA1 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.46■□□□□ 0.71
SPHK1Q9NYA1 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.46■□□□□ 0.71
SPHK1Q9NYA1 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPHK1Q9NYA1 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SPHK1Q9NYA1 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.46■□□□□ 0.71
SPHK1Q9NYA1 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPHK1Q9NYA1 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SPHK1Q9NYA1 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPHK1Q9NYA1 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SPHK1Q9NYA1 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.45■□□□□ 0.7
SPHK1Q9NYA1 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPHK1Q9NYA1 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPHK1Q9NYA1 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPHK1Q9NYA1 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPHK1Q9NYA1 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPHK1Q9NYA1 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPHK1Q9NYA1 ESRRAP1-201ENST00000400596 1257 ntBASIC19.45■□□□□ 0.7
SPHK1Q9NYA1 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.45■□□□□ 0.7
SPHK1Q9NYA1 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPHK1Q9NYA1 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SPHK1Q9NYA1 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SPHK1Q9NYA1 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.45■□□□□ 0.7
SPHK1Q9NYA1 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPHK1Q9NYA1 AC073314.1-201ENST00000568729 2216 ntBASIC19.45■□□□□ 0.7
SPHK1Q9NYA1 DPP3P2-201ENST00000416030 1696 ntBASIC19.45■□□□□ 0.7
SPHK1Q9NYA1 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.45■□□□□ 0.7
SPHK1Q9NYA1 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SPHK1Q9NYA1 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SPHK1Q9NYA1 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPHK1Q9NYA1 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SPHK1Q9NYA1 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPHK1Q9NYA1 PTBP1P-201ENST00000554374 1601 ntBASIC19.44■□□□□ 0.7
SPHK1Q9NYA1 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPHK1Q9NYA1 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SPHK1Q9NYA1 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPHK1Q9NYA1 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SPHK1Q9NYA1 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SPHK1Q9NYA1 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SPHK1Q9NYA1 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms