Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.55■□□□□ 0.72
CUEDC1Q9NWM3 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.55■□□□□ 0.72
CUEDC1Q9NWM3 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.55■□□□□ 0.72
CUEDC1Q9NWM3 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CUEDC1Q9NWM3 AC008687.6-201ENST00000596318 630 ntBASIC19.55■□□□□ 0.72
CUEDC1Q9NWM3 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CUEDC1Q9NWM3 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.55■□□□□ 0.72
CUEDC1Q9NWM3 AP005212.1-201ENST00000581547 1997 ntBASIC19.55■□□□□ 0.72
CUEDC1Q9NWM3 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CUEDC1Q9NWM3 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CUEDC1Q9NWM3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CUEDC1Q9NWM3 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CUEDC1Q9NWM3 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CUEDC1Q9NWM3 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.54■□□□□ 0.72
CUEDC1Q9NWM3 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CUEDC1Q9NWM3 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CUEDC1Q9NWM3 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.54■□□□□ 0.72
CUEDC1Q9NWM3 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CUEDC1Q9NWM3 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.54■□□□□ 0.72
CUEDC1Q9NWM3 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CUEDC1Q9NWM3 ITM2C-210ENST00000620962 501 ntBASIC19.54■□□□□ 0.72
CUEDC1Q9NWM3 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.54■□□□□ 0.72
CUEDC1Q9NWM3 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CUEDC1Q9NWM3 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CUEDC1Q9NWM3 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CUEDC1Q9NWM3 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CUEDC1Q9NWM3 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CUEDC1Q9NWM3 LINC01006-201ENST00000333319 2292 ntBASIC19.54■□□□□ 0.72
CUEDC1Q9NWM3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.54■□□□□ 0.72
CUEDC1Q9NWM3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CUEDC1Q9NWM3 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CUEDC1Q9NWM3 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CUEDC1Q9NWM3 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CUEDC1Q9NWM3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.53■□□□□ 0.72
CUEDC1Q9NWM3 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CUEDC1Q9NWM3 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CUEDC1Q9NWM3 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CUEDC1Q9NWM3 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CUEDC1Q9NWM3 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.53■□□□□ 0.72
CUEDC1Q9NWM3 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CUEDC1Q9NWM3 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CUEDC1Q9NWM3 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.53■□□□□ 0.72
CUEDC1Q9NWM3 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CUEDC1Q9NWM3 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CUEDC1Q9NWM3 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.53■□□□□ 0.72
CUEDC1Q9NWM3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.53■□□□□ 0.72
CUEDC1Q9NWM3 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.53■□□□□ 0.72
CUEDC1Q9NWM3 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.53■□□□□ 0.72
CUEDC1Q9NWM3 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.53■□□□□ 0.72
CUEDC1Q9NWM3 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CUEDC1Q9NWM3 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.53■□□□□ 0.72
CUEDC1Q9NWM3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CUEDC1Q9NWM3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CUEDC1Q9NWM3 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CUEDC1Q9NWM3 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CUEDC1Q9NWM3 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CUEDC1Q9NWM3 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.52■□□□□ 0.72
CUEDC1Q9NWM3 AC092720.2-201ENST00000602388 1665 ntBASIC19.52■□□□□ 0.72
CUEDC1Q9NWM3 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CUEDC1Q9NWM3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.52■□□□□ 0.72
CUEDC1Q9NWM3 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CUEDC1Q9NWM3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CUEDC1Q9NWM3 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CUEDC1Q9NWM3 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CUEDC1Q9NWM3 AC020907.5-201ENST00000624372 1936 ntBASIC19.52■□□□□ 0.72
CUEDC1Q9NWM3 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
CUEDC1Q9NWM3 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CUEDC1Q9NWM3 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CUEDC1Q9NWM3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CUEDC1Q9NWM3 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.51■□□□□ 0.71
CUEDC1Q9NWM3 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.51■□□□□ 0.71
CUEDC1Q9NWM3 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CUEDC1Q9NWM3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CUEDC1Q9NWM3 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CUEDC1Q9NWM3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.51■□□□□ 0.71
CUEDC1Q9NWM3 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CUEDC1Q9NWM3 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CUEDC1Q9NWM3 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CUEDC1Q9NWM3 POU5F1P3-201ENST00000428824 1078 ntBASIC19.51■□□□□ 0.71
CUEDC1Q9NWM3 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
CUEDC1Q9NWM3 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.51■□□□□ 0.71
CUEDC1Q9NWM3 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CUEDC1Q9NWM3 AC092118.2-201ENST00000613495 667 ntBASIC19.51■□□□□ 0.71
CUEDC1Q9NWM3 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.51■□□□□ 0.71
CUEDC1Q9NWM3 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CUEDC1Q9NWM3 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.51■□□□□ 0.71
CUEDC1Q9NWM3 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CUEDC1Q9NWM3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CUEDC1Q9NWM3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CUEDC1Q9NWM3 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.51■□□□□ 0.71
CUEDC1Q9NWM3 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CUEDC1Q9NWM3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CUEDC1Q9NWM3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CUEDC1Q9NWM3 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CUEDC1Q9NWM3 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CUEDC1Q9NWM3 KRT18P29-201ENST00000397031 1267 ntBASIC19.5■□□□□ 0.71
CUEDC1Q9NWM3 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.5■□□□□ 0.71
CUEDC1Q9NWM3 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.5■□□□□ 0.71
CUEDC1Q9NWM3 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.5■□□□□ 0.71
CUEDC1Q9NWM3 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms