Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 CYP2T3P-201ENST00000601990 817 ntBASIC20.21■□□□□ 0.83
TREX1Q9NSU2 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.21■□□□□ 0.83
TREX1Q9NSU2 AC105020.6-201ENST00000621523 1217 ntBASIC20.21■□□□□ 0.83
TREX1Q9NSU2 OR10C1-204ENST00000622521 1039 ntBASIC20.21■□□□□ 0.83
TREX1Q9NSU2 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.21■□□□□ 0.83
TREX1Q9NSU2 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TREX1Q9NSU2 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TREX1Q9NSU2 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TREX1Q9NSU2 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TREX1Q9NSU2 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.21■□□□□ 0.83
TREX1Q9NSU2 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TREX1Q9NSU2 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
TREX1Q9NSU2 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TREX1Q9NSU2 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TREX1Q9NSU2 PTBP1P-201ENST00000554374 1601 ntBASIC20.2■□□□□ 0.82
TREX1Q9NSU2 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.2■□□□□ 0.82
TREX1Q9NSU2 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TREX1Q9NSU2 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TREX1Q9NSU2 AFG3L1P-217ENST00000557444 2447 ntBASIC20.2■□□□□ 0.82
TREX1Q9NSU2 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TREX1Q9NSU2 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
TREX1Q9NSU2 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.2■□□□□ 0.82
TREX1Q9NSU2 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
TREX1Q9NSU2 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TREX1Q9NSU2 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TREX1Q9NSU2 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.2■□□□□ 0.82
TREX1Q9NSU2 BX119927.1-201ENST00000636596 1552 ntBASIC20.2■□□□□ 0.82
TREX1Q9NSU2 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TREX1Q9NSU2 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.2■□□□□ 0.82
TREX1Q9NSU2 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TREX1Q9NSU2 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TREX1Q9NSU2 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TREX1Q9NSU2 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
TREX1Q9NSU2 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TREX1Q9NSU2 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TREX1Q9NSU2 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TREX1Q9NSU2 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
TREX1Q9NSU2 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.19■□□□□ 0.82
TREX1Q9NSU2 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.19■□□□□ 0.82
TREX1Q9NSU2 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.19■□□□□ 0.82
TREX1Q9NSU2 AC080038.1-201ENST00000611274 1154 ntBASIC20.19■□□□□ 0.82
TREX1Q9NSU2 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.19■□□□□ 0.82
TREX1Q9NSU2 AC008694.1-202ENST00000636953 945 ntBASIC20.19■□□□□ 0.82
TREX1Q9NSU2 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
TREX1Q9NSU2 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TREX1Q9NSU2 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
TREX1Q9NSU2 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TREX1Q9NSU2 AC010980.2-201ENST00000587099 1412 ntBASIC20.19■□□□□ 0.82
TREX1Q9NSU2 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
TREX1Q9NSU2 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TREX1Q9NSU2 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TREX1Q9NSU2 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TREX1Q9NSU2 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.18■□□□□ 0.82
TREX1Q9NSU2 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
TREX1Q9NSU2 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.18■□□□□ 0.82
TREX1Q9NSU2 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TREX1Q9NSU2 AL355472.2-201ENST00000422958 438 ntBASIC20.18■□□□□ 0.82
TREX1Q9NSU2 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TREX1Q9NSU2 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.18■□□□□ 0.82
TREX1Q9NSU2 AC005181.1-201ENST00000604782 1256 ntBASIC20.18■□□□□ 0.82
TREX1Q9NSU2 AC073111.5-205ENST00000641717 521 ntBASIC20.18■□□□□ 0.82
TREX1Q9NSU2 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TREX1Q9NSU2 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.18■□□□□ 0.82
TREX1Q9NSU2 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TREX1Q9NSU2 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TREX1Q9NSU2 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.18■□□□□ 0.82
TREX1Q9NSU2 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TREX1Q9NSU2 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TREX1Q9NSU2 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TREX1Q9NSU2 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TREX1Q9NSU2 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TREX1Q9NSU2 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TREX1Q9NSU2 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
TREX1Q9NSU2 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TREX1Q9NSU2 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
TREX1Q9NSU2 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.17■□□□□ 0.82
TREX1Q9NSU2 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.17■□□□□ 0.82
TREX1Q9NSU2 AL512625.2-201ENST00000417533 625 ntBASIC20.17■□□□□ 0.82
TREX1Q9NSU2 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
TREX1Q9NSU2 CDCA4P2-201ENST00000441182 718 ntBASIC20.17■□□□□ 0.82
TREX1Q9NSU2 AC093787.1-201ENST00000450396 207 ntBASIC20.17■□□□□ 0.82
TREX1Q9NSU2 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.17■□□□□ 0.82
TREX1Q9NSU2 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
TREX1Q9NSU2 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.17■□□□□ 0.82
TREX1Q9NSU2 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TREX1Q9NSU2 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TREX1Q9NSU2 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TREX1Q9NSU2 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TREX1Q9NSU2 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.17■□□□□ 0.82
TREX1Q9NSU2 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.17■□□□□ 0.82
TREX1Q9NSU2 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TREX1Q9NSU2 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TREX1Q9NSU2 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TREX1Q9NSU2 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
TREX1Q9NSU2 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TREX1Q9NSU2 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.16■□□□□ 0.82
TREX1Q9NSU2 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.16■□□□□ 0.82
TREX1Q9NSU2 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TREX1Q9NSU2 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
TREX1Q9NSU2 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms