Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC24.01■■□□□ 1.43
DDX4Q9NQI0 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC24.01■■□□□ 1.43
DDX4Q9NQI0 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC24.01■■□□□ 1.43
DDX4Q9NQI0 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
DDX4Q9NQI0 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
DDX4Q9NQI0 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC24.01■■□□□ 1.43
DDX4Q9NQI0 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
DDX4Q9NQI0 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC24■■□□□ 1.43
DDX4Q9NQI0 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
DDX4Q9NQI0 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
DDX4Q9NQI0 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC24■■□□□ 1.43
DDX4Q9NQI0 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC24■■□□□ 1.43
DDX4Q9NQI0 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
DDX4Q9NQI0 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC24■■□□□ 1.43
DDX4Q9NQI0 GXYLT1P3-201ENST00000453058 1193 ntBASIC24■■□□□ 1.43
DDX4Q9NQI0 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC24■■□□□ 1.43
DDX4Q9NQI0 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC24■■□□□ 1.43
DDX4Q9NQI0 AL049637.2-201ENST00000641778 930 ntBASIC24■■□□□ 1.43
DDX4Q9NQI0 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC24■■□□□ 1.43
DDX4Q9NQI0 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
DDX4Q9NQI0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
DDX4Q9NQI0 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
DDX4Q9NQI0 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC24■■□□□ 1.43
DDX4Q9NQI0 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
DDX4Q9NQI0 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
DDX4Q9NQI0 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
DDX4Q9NQI0 PTBP1P-201ENST00000554374 1601 ntBASIC23.99■■□□□ 1.43
DDX4Q9NQI0 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
DDX4Q9NQI0 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.99■■□□□ 1.43
DDX4Q9NQI0 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
DDX4Q9NQI0 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
DDX4Q9NQI0 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
DDX4Q9NQI0 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
DDX4Q9NQI0 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
DDX4Q9NQI0 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC23.99■■□□□ 1.43
DDX4Q9NQI0 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
DDX4Q9NQI0 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
DDX4Q9NQI0 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC23.99■■□□□ 1.43
DDX4Q9NQI0 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC23.99■■□□□ 1.43
DDX4Q9NQI0 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
DDX4Q9NQI0 AC113410.3-201ENST00000623366 203 ntBASIC23.99■■□□□ 1.43
DDX4Q9NQI0 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC23.99■■□□□ 1.43
DDX4Q9NQI0 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
DDX4Q9NQI0 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
DDX4Q9NQI0 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC23.98■■□□□ 1.43
DDX4Q9NQI0 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
DDX4Q9NQI0 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC23.98■■□□□ 1.43
DDX4Q9NQI0 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
DDX4Q9NQI0 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
DDX4Q9NQI0 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
DDX4Q9NQI0 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC23.98■■□□□ 1.43
DDX4Q9NQI0 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC23.98■■□□□ 1.43
DDX4Q9NQI0 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC23.98■■□□□ 1.43
DDX4Q9NQI0 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
DDX4Q9NQI0 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC23.98■■□□□ 1.43
DDX4Q9NQI0 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC23.98■■□□□ 1.43
DDX4Q9NQI0 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC23.98■■□□□ 1.43
DDX4Q9NQI0 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
DDX4Q9NQI0 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
DDX4Q9NQI0 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
DDX4Q9NQI0 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC23.98■■□□□ 1.43
DDX4Q9NQI0 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC23.98■■□□□ 1.43
DDX4Q9NQI0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
DDX4Q9NQI0 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
DDX4Q9NQI0 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC23.98■■□□□ 1.43
DDX4Q9NQI0 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
DDX4Q9NQI0 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
DDX4Q9NQI0 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC23.97■■□□□ 1.43
DDX4Q9NQI0 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
DDX4Q9NQI0 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
DDX4Q9NQI0 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC23.97■■□□□ 1.43
DDX4Q9NQI0 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC23.97■■□□□ 1.43
DDX4Q9NQI0 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
DDX4Q9NQI0 TSPY15P-201ENST00000457163 923 ntBASIC23.97■■□□□ 1.43
DDX4Q9NQI0 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
DDX4Q9NQI0 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
DDX4Q9NQI0 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC23.97■■□□□ 1.43
DDX4Q9NQI0 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
DDX4Q9NQI0 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
DDX4Q9NQI0 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC23.97■■□□□ 1.43
DDX4Q9NQI0 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.97■■□□□ 1.43
DDX4Q9NQI0 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
DDX4Q9NQI0 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC23.96■■□□□ 1.43
DDX4Q9NQI0 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
DDX4Q9NQI0 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
DDX4Q9NQI0 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC23.96■■□□□ 1.43
DDX4Q9NQI0 AL121829.2-201ENST00000620908 328 ntBASIC23.96■■□□□ 1.43
DDX4Q9NQI0 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC23.96■■□□□ 1.43
DDX4Q9NQI0 AC073912.3-201ENST00000624414 853 ntBASIC23.96■■□□□ 1.43
DDX4Q9NQI0 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
DDX4Q9NQI0 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
DDX4Q9NQI0 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC23.95■■□□□ 1.43
DDX4Q9NQI0 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.43
DDX4Q9NQI0 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC23.95■■□□□ 1.42
DDX4Q9NQI0 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
DDX4Q9NQI0 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
DDX4Q9NQI0 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
DDX4Q9NQI0 RARRES2P10-201ENST00000564312 460 ntBASIC23.95■■□□□ 1.42
DDX4Q9NQI0 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
DDX4Q9NQI0 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms