Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NUCKS1Q9H1E3 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
NUCKS1Q9H1E3 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.88■■□□□ 1.09
NUCKS1Q9H1E3 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.88■■□□□ 1.09
NUCKS1Q9H1E3 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NUCKS1Q9H1E3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NUCKS1Q9H1E3 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NUCKS1Q9H1E3 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.88■■□□□ 1.09
NUCKS1Q9H1E3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NUCKS1Q9H1E3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
NUCKS1Q9H1E3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.88■■□□□ 1.09
NUCKS1Q9H1E3 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
NUCKS1Q9H1E3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.88■■□□□ 1.09
NUCKS1Q9H1E3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
NUCKS1Q9H1E3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NUCKS1Q9H1E3 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NUCKS1Q9H1E3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NUCKS1Q9H1E3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.88■■□□□ 1.09
NUCKS1Q9H1E3 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NUCKS1Q9H1E3 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.88■■□□□ 1.09
NUCKS1Q9H1E3 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NUCKS1Q9H1E3 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.87■■□□□ 1.09
NUCKS1Q9H1E3 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
NUCKS1Q9H1E3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NUCKS1Q9H1E3 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NUCKS1Q9H1E3 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NUCKS1Q9H1E3 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
NUCKS1Q9H1E3 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NUCKS1Q9H1E3 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.87■■□□□ 1.09
NUCKS1Q9H1E3 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NUCKS1Q9H1E3 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NUCKS1Q9H1E3 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
NUCKS1Q9H1E3 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NUCKS1Q9H1E3 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.87■■□□□ 1.09
NUCKS1Q9H1E3 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
NUCKS1Q9H1E3 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NUCKS1Q9H1E3 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.87■■□□□ 1.09
NUCKS1Q9H1E3 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.87■■□□□ 1.09
NUCKS1Q9H1E3 CDV3P1-201ENST00000471403 739 ntBASIC21.87■■□□□ 1.09
NUCKS1Q9H1E3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
NUCKS1Q9H1E3 UBE2DNL-204ENST00000602536 740 ntBASIC21.87■■□□□ 1.09
NUCKS1Q9H1E3 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NUCKS1Q9H1E3 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
NUCKS1Q9H1E3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NUCKS1Q9H1E3 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NUCKS1Q9H1E3 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
NUCKS1Q9H1E3 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NUCKS1Q9H1E3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NUCKS1Q9H1E3 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NUCKS1Q9H1E3 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NUCKS1Q9H1E3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NUCKS1Q9H1E3 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.86■■□□□ 1.09
NUCKS1Q9H1E3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NUCKS1Q9H1E3 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NUCKS1Q9H1E3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.86■■□□□ 1.09
NUCKS1Q9H1E3 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.86■■□□□ 1.09
NUCKS1Q9H1E3 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
NUCKS1Q9H1E3 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
NUCKS1Q9H1E3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.86■■□□□ 1.09
NUCKS1Q9H1E3 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
NUCKS1Q9H1E3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.86■■□□□ 1.09
NUCKS1Q9H1E3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.86■■□□□ 1.09
NUCKS1Q9H1E3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.86■■□□□ 1.09
NUCKS1Q9H1E3 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NUCKS1Q9H1E3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.85■■□□□ 1.09
NUCKS1Q9H1E3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.85■■□□□ 1.09
NUCKS1Q9H1E3 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
NUCKS1Q9H1E3 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
NUCKS1Q9H1E3 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NUCKS1Q9H1E3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
NUCKS1Q9H1E3 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
NUCKS1Q9H1E3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.85■■□□□ 1.09
NUCKS1Q9H1E3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
NUCKS1Q9H1E3 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.85■■□□□ 1.09
NUCKS1Q9H1E3 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.85■■□□□ 1.09
NUCKS1Q9H1E3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
NUCKS1Q9H1E3 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
NUCKS1Q9H1E3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NUCKS1Q9H1E3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NUCKS1Q9H1E3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
NUCKS1Q9H1E3 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
NUCKS1Q9H1E3 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.84■■□□□ 1.09
NUCKS1Q9H1E3 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.84■■□□□ 1.09
NUCKS1Q9H1E3 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.84■■□□□ 1.09
NUCKS1Q9H1E3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.84■■□□□ 1.09
NUCKS1Q9H1E3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NUCKS1Q9H1E3 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NUCKS1Q9H1E3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.84■■□□□ 1.09
NUCKS1Q9H1E3 PGM5P4-201ENST00000421970 445 ntBASIC21.84■■□□□ 1.09
NUCKS1Q9H1E3 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.84■■□□□ 1.09
NUCKS1Q9H1E3 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
NUCKS1Q9H1E3 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
NUCKS1Q9H1E3 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
NUCKS1Q9H1E3 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NUCKS1Q9H1E3 AC007952.6-201ENST00000573168 2673 ntBASIC21.83■■□□□ 1.09
NUCKS1Q9H1E3 AC003957.1-201ENST00000625108 2673 ntBASIC21.83■■□□□ 1.09
NUCKS1Q9H1E3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.83■■□□□ 1.09
NUCKS1Q9H1E3 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.83■■□□□ 1.09
NUCKS1Q9H1E3 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.83■■□□□ 1.09
NUCKS1Q9H1E3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms