Protein–RNA interactions for Protein: Q9H0Q0

FAM49A, Protein FAM49A, humanhuman

Predicted RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49AQ9H0Q0 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
FAM49AQ9H0Q0 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
FAM49AQ9H0Q0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
FAM49AQ9H0Q0 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
FAM49AQ9H0Q0 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
FAM49AQ9H0Q0 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC22.32■■□□□ 1.16
FAM49AQ9H0Q0 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC22.32■■□□□ 1.16
FAM49AQ9H0Q0 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC22.32■■□□□ 1.16
FAM49AQ9H0Q0 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.32■■□□□ 1.16
FAM49AQ9H0Q0 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
FAM49AQ9H0Q0 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC22.32■■□□□ 1.16
FAM49AQ9H0Q0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC22.32■■□□□ 1.16
FAM49AQ9H0Q0 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
FAM49AQ9H0Q0 AF106564.1-201ENST00000607058 2553 ntBASIC22.32■■□□□ 1.16
FAM49AQ9H0Q0 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
FAM49AQ9H0Q0 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
FAM49AQ9H0Q0 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
FAM49AQ9H0Q0 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
FAM49AQ9H0Q0 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
FAM49AQ9H0Q0 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
FAM49AQ9H0Q0 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
FAM49AQ9H0Q0 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
FAM49AQ9H0Q0 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC22.31■■□□□ 1.16
FAM49AQ9H0Q0 FEM1AP4-201ENST00000443167 1987 ntBASIC22.31■■□□□ 1.16
FAM49AQ9H0Q0 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
FAM49AQ9H0Q0 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
FAM49AQ9H0Q0 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC22.31■■□□□ 1.16
FAM49AQ9H0Q0 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
FAM49AQ9H0Q0 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
FAM49AQ9H0Q0 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
FAM49AQ9H0Q0 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
FAM49AQ9H0Q0 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
FAM49AQ9H0Q0 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC22.31■■□□□ 1.16
FAM49AQ9H0Q0 HES2-206ENST00000489730 730 ntTSL 2 BASIC22.31■■□□□ 1.16
FAM49AQ9H0Q0 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC22.31■■□□□ 1.16
FAM49AQ9H0Q0 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC22.31■■□□□ 1.16
FAM49AQ9H0Q0 MIR4497-201ENST00000583208 89 ntBASIC22.31■■□□□ 1.16
FAM49AQ9H0Q0 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC22.31■■□□□ 1.16
FAM49AQ9H0Q0 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC22.31■■□□□ 1.16
FAM49AQ9H0Q0 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
FAM49AQ9H0Q0 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
FAM49AQ9H0Q0 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
FAM49AQ9H0Q0 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
FAM49AQ9H0Q0 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
FAM49AQ9H0Q0 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
FAM49AQ9H0Q0 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
FAM49AQ9H0Q0 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
FAM49AQ9H0Q0 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
FAM49AQ9H0Q0 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC22.3■■□□□ 1.16
FAM49AQ9H0Q0 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC22.3■■□□□ 1.16
FAM49AQ9H0Q0 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC22.3■■□□□ 1.16
FAM49AQ9H0Q0 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC22.3■■□□□ 1.16
FAM49AQ9H0Q0 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
FAM49AQ9H0Q0 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
FAM49AQ9H0Q0 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
FAM49AQ9H0Q0 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
FAM49AQ9H0Q0 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
FAM49AQ9H0Q0 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
FAM49AQ9H0Q0 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
FAM49AQ9H0Q0 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
FAM49AQ9H0Q0 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
FAM49AQ9H0Q0 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
FAM49AQ9H0Q0 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
FAM49AQ9H0Q0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
FAM49AQ9H0Q0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
FAM49AQ9H0Q0 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
FAM49AQ9H0Q0 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
FAM49AQ9H0Q0 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC22.29■■□□□ 1.16
FAM49AQ9H0Q0 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
FAM49AQ9H0Q0 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
FAM49AQ9H0Q0 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
FAM49AQ9H0Q0 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC22.29■■□□□ 1.16
FAM49AQ9H0Q0 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
FAM49AQ9H0Q0 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
FAM49AQ9H0Q0 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC22.29■■□□□ 1.16
FAM49AQ9H0Q0 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
FAM49AQ9H0Q0 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
FAM49AQ9H0Q0 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
FAM49AQ9H0Q0 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.29■■□□□ 1.16
FAM49AQ9H0Q0 PKD1P6-201ENST00000343738 4769 ntBASIC22.29■■□□□ 1.16
FAM49AQ9H0Q0 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
FAM49AQ9H0Q0 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
FAM49AQ9H0Q0 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
FAM49AQ9H0Q0 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC22.28■■□□□ 1.16
FAM49AQ9H0Q0 AC133681.1-201ENST00000465482 601 ntBASIC22.28■■□□□ 1.16
FAM49AQ9H0Q0 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
FAM49AQ9H0Q0 REXO2-216ENST00000544196 452 ntTSL 3 BASIC22.28■■□□□ 1.16
FAM49AQ9H0Q0 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC22.28■■□□□ 1.16
FAM49AQ9H0Q0 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC22.28■■□□□ 1.16
FAM49AQ9H0Q0 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
FAM49AQ9H0Q0 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC22.28■■□□□ 1.16
FAM49AQ9H0Q0 AC124283.5-201ENST00000624661 1809 ntBASIC22.28■■□□□ 1.16
FAM49AQ9H0Q0 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
FAM49AQ9H0Q0 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC22.28■■□□□ 1.16
FAM49AQ9H0Q0 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
FAM49AQ9H0Q0 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
FAM49AQ9H0Q0 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
FAM49AQ9H0Q0 MDFI-202ENST00000373050 809 ntTSL 2 BASIC22.27■■□□□ 1.16
FAM49AQ9H0Q0 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC22.27■■□□□ 1.16
FAM49AQ9H0Q0 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms