Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 POU5F1P3-201ENST00000428824 1078 ntBASIC20.25■□□□□ 0.83
ECHDC3Q96DC8 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
ECHDC3Q96DC8 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.25■□□□□ 0.83
ECHDC3Q96DC8 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.25■□□□□ 0.83
ECHDC3Q96DC8 UNC93B4-201ENST00000505679 747 ntBASIC20.25■□□□□ 0.83
ECHDC3Q96DC8 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.25■□□□□ 0.83
ECHDC3Q96DC8 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.25■□□□□ 0.83
ECHDC3Q96DC8 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.25■□□□□ 0.83
ECHDC3Q96DC8 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.25■□□□□ 0.83
ECHDC3Q96DC8 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ECHDC3Q96DC8 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ECHDC3Q96DC8 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.25■□□□□ 0.83
ECHDC3Q96DC8 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.25■□□□□ 0.83
ECHDC3Q96DC8 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
ECHDC3Q96DC8 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ECHDC3Q96DC8 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
ECHDC3Q96DC8 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ECHDC3Q96DC8 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ECHDC3Q96DC8 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ECHDC3Q96DC8 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ECHDC3Q96DC8 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ECHDC3Q96DC8 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.24■□□□□ 0.83
ECHDC3Q96DC8 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ECHDC3Q96DC8 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ECHDC3Q96DC8 ESRRAP1-201ENST00000400596 1257 ntBASIC20.24■□□□□ 0.83
ECHDC3Q96DC8 AC026366.1-201ENST00000488803 879 ntBASIC20.24■□□□□ 0.83
ECHDC3Q96DC8 AP003097.1-201ENST00000530657 1135 ntBASIC20.24■□□□□ 0.83
ECHDC3Q96DC8 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.24■□□□□ 0.83
ECHDC3Q96DC8 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.24■□□□□ 0.83
ECHDC3Q96DC8 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.24■□□□□ 0.83
ECHDC3Q96DC8 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ECHDC3Q96DC8 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ECHDC3Q96DC8 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ECHDC3Q96DC8 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ECHDC3Q96DC8 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ECHDC3Q96DC8 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ECHDC3Q96DC8 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ECHDC3Q96DC8 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
ECHDC3Q96DC8 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
ECHDC3Q96DC8 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.23■□□□□ 0.83
ECHDC3Q96DC8 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ECHDC3Q96DC8 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ECHDC3Q96DC8 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ECHDC3Q96DC8 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.23■□□□□ 0.83
ECHDC3Q96DC8 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.23■□□□□ 0.83
ECHDC3Q96DC8 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ECHDC3Q96DC8 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ECHDC3Q96DC8 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
ECHDC3Q96DC8 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ECHDC3Q96DC8 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ECHDC3Q96DC8 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ECHDC3Q96DC8 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
ECHDC3Q96DC8 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
ECHDC3Q96DC8 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.23■□□□□ 0.83
ECHDC3Q96DC8 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
ECHDC3Q96DC8 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ECHDC3Q96DC8 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ECHDC3Q96DC8 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ECHDC3Q96DC8 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.23■□□□□ 0.83
ECHDC3Q96DC8 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.23■□□□□ 0.83
ECHDC3Q96DC8 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.23■□□□□ 0.83
ECHDC3Q96DC8 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ECHDC3Q96DC8 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
ECHDC3Q96DC8 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
ECHDC3Q96DC8 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ECHDC3Q96DC8 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ECHDC3Q96DC8 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
ECHDC3Q96DC8 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ECHDC3Q96DC8 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.22■□□□□ 0.83
ECHDC3Q96DC8 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ECHDC3Q96DC8 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ECHDC3Q96DC8 SOX15-203ENST00000570788 1093 ntBASIC20.22■□□□□ 0.83
ECHDC3Q96DC8 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ECHDC3Q96DC8 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.22■□□□□ 0.83
ECHDC3Q96DC8 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.22■□□□□ 0.83
ECHDC3Q96DC8 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ECHDC3Q96DC8 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ECHDC3Q96DC8 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ECHDC3Q96DC8 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.22■□□□□ 0.83
ECHDC3Q96DC8 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ECHDC3Q96DC8 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.22■□□□□ 0.83
ECHDC3Q96DC8 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.22■□□□□ 0.83
ECHDC3Q96DC8 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.22■□□□□ 0.83
ECHDC3Q96DC8 DPP3P2-201ENST00000416030 1696 ntBASIC20.22■□□□□ 0.83
ECHDC3Q96DC8 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
ECHDC3Q96DC8 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.22■□□□□ 0.83
ECHDC3Q96DC8 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
ECHDC3Q96DC8 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
ECHDC3Q96DC8 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ECHDC3Q96DC8 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
ECHDC3Q96DC8 AC073314.1-201ENST00000568729 2216 ntBASIC20.21■□□□□ 0.83
ECHDC3Q96DC8 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.21■□□□□ 0.83
ECHDC3Q96DC8 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ECHDC3Q96DC8 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.21■□□□□ 0.83
ECHDC3Q96DC8 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.21■□□□□ 0.83
ECHDC3Q96DC8 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ECHDC3Q96DC8 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ECHDC3Q96DC8 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ECHDC3Q96DC8 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
ECHDC3Q96DC8 AP005212.1-201ENST00000581547 1997 ntBASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms