Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXRED1Q96CU9 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.53■□□□□ 0.4
FOXRED1Q96CU9 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXRED1Q96CU9 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXRED1Q96CU9 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
FOXRED1Q96CU9 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.53■□□□□ 0.4
FOXRED1Q96CU9 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXRED1Q96CU9 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FOXRED1Q96CU9 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
FOXRED1Q96CU9 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
FOXRED1Q96CU9 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.52■□□□□ 0.4
FOXRED1Q96CU9 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
FOXRED1Q96CU9 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
FOXRED1Q96CU9 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.52■□□□□ 0.4
FOXRED1Q96CU9 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
FOXRED1Q96CU9 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
FOXRED1Q96CU9 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FOXRED1Q96CU9 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.52■□□□□ 0.4
FOXRED1Q96CU9 AC097381.1-201ENST00000429019 1296 ntBASIC17.52■□□□□ 0.4
FOXRED1Q96CU9 AC079140.4-201ENST00000507448 529 ntBASIC17.52■□□□□ 0.4
FOXRED1Q96CU9 MIR5787-201ENST00000611784 55 ntBASIC17.52■□□□□ 0.4
FOXRED1Q96CU9 MIR6821-201ENST00000617625 74 ntBASIC17.52■□□□□ 0.4
FOXRED1Q96CU9 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
FOXRED1Q96CU9 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
FOXRED1Q96CU9 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
FOXRED1Q96CU9 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FOXRED1Q96CU9 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
FOXRED1Q96CU9 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.52■□□□□ 0.39
FOXRED1Q96CU9 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
FOXRED1Q96CU9 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.52■□□□□ 0.39
FOXRED1Q96CU9 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
FOXRED1Q96CU9 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
FOXRED1Q96CU9 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
FOXRED1Q96CU9 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
FOXRED1Q96CU9 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXRED1Q96CU9 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.51■□□□□ 0.39
FOXRED1Q96CU9 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXRED1Q96CU9 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXRED1Q96CU9 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXRED1Q96CU9 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXRED1Q96CU9 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.51■□□□□ 0.39
FOXRED1Q96CU9 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXRED1Q96CU9 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXRED1Q96CU9 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXRED1Q96CU9 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXRED1Q96CU9 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.51■□□□□ 0.39
FOXRED1Q96CU9 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.51■□□□□ 0.39
FOXRED1Q96CU9 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.51■□□□□ 0.39
FOXRED1Q96CU9 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXRED1Q96CU9 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
FOXRED1Q96CU9 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
FOXRED1Q96CU9 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.51■□□□□ 0.39
FOXRED1Q96CU9 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXRED1Q96CU9 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXRED1Q96CU9 LINC02228-203ENST00000641970 1355 ntBASIC17.51■□□□□ 0.39
FOXRED1Q96CU9 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXRED1Q96CU9 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
FOXRED1Q96CU9 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXRED1Q96CU9 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXRED1Q96CU9 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXRED1Q96CU9 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXRED1Q96CU9 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXRED1Q96CU9 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXRED1Q96CU9 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXRED1Q96CU9 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.5■□□□□ 0.39
FOXRED1Q96CU9 AC087289.5-201ENST00000586076 3175 ntBASIC17.5■□□□□ 0.39
FOXRED1Q96CU9 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXRED1Q96CU9 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
FOXRED1Q96CU9 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXRED1Q96CU9 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.5■□□□□ 0.39
FOXRED1Q96CU9 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.5■□□□□ 0.39
FOXRED1Q96CU9 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
FOXRED1Q96CU9 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
FOXRED1Q96CU9 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXRED1Q96CU9 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXRED1Q96CU9 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.5■□□□□ 0.39
FOXRED1Q96CU9 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
FOXRED1Q96CU9 BX323043.1-201ENST00000641006 1765 ntBASIC17.5■□□□□ 0.39
FOXRED1Q96CU9 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.5■□□□□ 0.39
FOXRED1Q96CU9 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXRED1Q96CU9 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
FOXRED1Q96CU9 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXRED1Q96CU9 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
FOXRED1Q96CU9 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXRED1Q96CU9 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
FOXRED1Q96CU9 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.5■□□□□ 0.39
FOXRED1Q96CU9 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXRED1Q96CU9 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.49■□□□□ 0.39
FOXRED1Q96CU9 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
FOXRED1Q96CU9 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.49■□□□□ 0.39
FOXRED1Q96CU9 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.49■□□□□ 0.39
FOXRED1Q96CU9 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.49■□□□□ 0.39
FOXRED1Q96CU9 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.49■□□□□ 0.39
FOXRED1Q96CU9 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
FOXRED1Q96CU9 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FOXRED1Q96CU9 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
FOXRED1Q96CU9 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FOXRED1Q96CU9 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.49■□□□□ 0.39
FOXRED1Q96CU9 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FOXRED1Q96CU9 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms