Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC22.68■■□□□ 1.22
ATP6V0A1Q93050 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ATP6V0A1Q93050 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ATP6V0A1Q93050 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
ATP6V0A1Q93050 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ATP6V0A1Q93050 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC22.67■■□□□ 1.22
ATP6V0A1Q93050 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC22.67■■□□□ 1.22
ATP6V0A1Q93050 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC22.67■■□□□ 1.22
ATP6V0A1Q93050 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
ATP6V0A1Q93050 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC22.67■■□□□ 1.22
ATP6V0A1Q93050 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
ATP6V0A1Q93050 SPIB-206ENST00000596074 847 ntTSL 2 BASIC22.67■■□□□ 1.22
ATP6V0A1Q93050 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
ATP6V0A1Q93050 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC22.67■■□□□ 1.22
ATP6V0A1Q93050 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
ATP6V0A1Q93050 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC22.67■■□□□ 1.22
ATP6V0A1Q93050 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
ATP6V0A1Q93050 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ATP6V0A1Q93050 MIR718-201ENST00000390190 70 ntBASIC22.66■■□□□ 1.22
ATP6V0A1Q93050 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC22.66■■□□□ 1.22
ATP6V0A1Q93050 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC22.66■■□□□ 1.22
ATP6V0A1Q93050 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC22.66■■□□□ 1.22
ATP6V0A1Q93050 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
ATP6V0A1Q93050 KLF2-202ENST00000592003 564 ntTSL 3 BASIC22.66■■□□□ 1.22
ATP6V0A1Q93050 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
ATP6V0A1Q93050 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ATP6V0A1Q93050 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
ATP6V0A1Q93050 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ATP6V0A1Q93050 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC22.65■■□□□ 1.22
ATP6V0A1Q93050 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
ATP6V0A1Q93050 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
ATP6V0A1Q93050 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC22.65■■□□□ 1.22
ATP6V0A1Q93050 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC22.65■■□□□ 1.22
ATP6V0A1Q93050 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC22.65■■□□□ 1.22
ATP6V0A1Q93050 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
ATP6V0A1Q93050 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
ATP6V0A1Q93050 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC22.65■■□□□ 1.22
ATP6V0A1Q93050 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ATP6V0A1Q93050 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC22.65■■□□□ 1.22
ATP6V0A1Q93050 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
ATP6V0A1Q93050 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
ATP6V0A1Q93050 AC007375.3-201ENST00000600936 2314 ntBASIC22.64■■□□□ 1.22
ATP6V0A1Q93050 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
ATP6V0A1Q93050 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
ATP6V0A1Q93050 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
ATP6V0A1Q93050 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.22
ATP6V0A1Q93050 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC22.64■■□□□ 1.22
ATP6V0A1Q93050 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC22.64■■□□□ 1.22
ATP6V0A1Q93050 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
ATP6V0A1Q93050 GGT1-206ENST00000404223 952 ntTSL 2 BASIC22.64■■□□□ 1.21
ATP6V0A1Q93050 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC22.64■■□□□ 1.21
ATP6V0A1Q93050 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ATP6V0A1Q93050 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ATP6V0A1Q93050 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC22.64■■□□□ 1.21
ATP6V0A1Q93050 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC22.64■■□□□ 1.21
ATP6V0A1Q93050 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ATP6V0A1Q93050 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ATP6V0A1Q93050 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
ATP6V0A1Q93050 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ATP6V0A1Q93050 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ATP6V0A1Q93050 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.63■■□□□ 1.21
ATP6V0A1Q93050 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ATP6V0A1Q93050 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
ATP6V0A1Q93050 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC22.63■■□□□ 1.21
ATP6V0A1Q93050 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
ATP6V0A1Q93050 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ATP6V0A1Q93050 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC22.63■■□□□ 1.21
ATP6V0A1Q93050 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ATP6V0A1Q93050 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ATP6V0A1Q93050 FP700111.2-201ENST00000619190 1892 ntBASIC22.63■■□□□ 1.21
ATP6V0A1Q93050 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ATP6V0A1Q93050 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
ATP6V0A1Q93050 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
ATP6V0A1Q93050 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ATP6V0A1Q93050 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC22.63■■□□□ 1.21
ATP6V0A1Q93050 SERP1-205ENST00000487153 657 ntTSL 4 BASIC22.63■■□□□ 1.21
ATP6V0A1Q93050 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC22.63■■□□□ 1.21
ATP6V0A1Q93050 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC22.63■■□□□ 1.21
ATP6V0A1Q93050 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
ATP6V0A1Q93050 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
ATP6V0A1Q93050 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
ATP6V0A1Q93050 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC22.62■■□□□ 1.21
ATP6V0A1Q93050 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ATP6V0A1Q93050 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
ATP6V0A1Q93050 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
ATP6V0A1Q93050 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ATP6V0A1Q93050 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
ATP6V0A1Q93050 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
ATP6V0A1Q93050 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
ATP6V0A1Q93050 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC22.62■■□□□ 1.21
ATP6V0A1Q93050 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
ATP6V0A1Q93050 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC22.62■■□□□ 1.21
ATP6V0A1Q93050 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
ATP6V0A1Q93050 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
ATP6V0A1Q93050 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
ATP6V0A1Q93050 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ATP6V0A1Q93050 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC22.61■■□□□ 1.21
ATP6V0A1Q93050 AL121603.2-201ENST00000557373 2117 ntBASIC22.61■■□□□ 1.21
ATP6V0A1Q93050 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
ATP6V0A1Q93050 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms