Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC23.16■■□□□ 1.3
U2AF1L4Q8WU68 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
U2AF1L4Q8WU68 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
U2AF1L4Q8WU68 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
U2AF1L4Q8WU68 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
U2AF1L4Q8WU68 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
U2AF1L4Q8WU68 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
U2AF1L4Q8WU68 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
U2AF1L4Q8WU68 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
U2AF1L4Q8WU68 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.16■■□□□ 1.3
U2AF1L4Q8WU68 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC23.16■■□□□ 1.3
U2AF1L4Q8WU68 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
U2AF1L4Q8WU68 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC23.15■■□□□ 1.3
U2AF1L4Q8WU68 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
U2AF1L4Q8WU68 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC23.15■■□□□ 1.3
U2AF1L4Q8WU68 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
U2AF1L4Q8WU68 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC23.15■■□□□ 1.3
U2AF1L4Q8WU68 PTPA-214ENST00000423100 988 ntTSL 2 BASIC23.15■■□□□ 1.3
U2AF1L4Q8WU68 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC23.15■■□□□ 1.3
U2AF1L4Q8WU68 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC23.15■■□□□ 1.3
U2AF1L4Q8WU68 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
U2AF1L4Q8WU68 AC005363.2-201ENST00000618631 242 ntBASIC23.15■■□□□ 1.3
U2AF1L4Q8WU68 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
U2AF1L4Q8WU68 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
U2AF1L4Q8WU68 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
U2AF1L4Q8WU68 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
U2AF1L4Q8WU68 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
U2AF1L4Q8WU68 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC23.15■■□□□ 1.3
U2AF1L4Q8WU68 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
U2AF1L4Q8WU68 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC23.14■■□□□ 1.3
U2AF1L4Q8WU68 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
U2AF1L4Q8WU68 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
U2AF1L4Q8WU68 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC23.14■■□□□ 1.29
U2AF1L4Q8WU68 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
U2AF1L4Q8WU68 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC23.14■■□□□ 1.29
U2AF1L4Q8WU68 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC23.14■■□□□ 1.29
U2AF1L4Q8WU68 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC23.14■■□□□ 1.29
U2AF1L4Q8WU68 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC23.14■■□□□ 1.29
U2AF1L4Q8WU68 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC23.14■■□□□ 1.29
U2AF1L4Q8WU68 P4HB-223ENST00000576390 439 ntTSL 4 BASIC23.14■■□□□ 1.29
U2AF1L4Q8WU68 AC145285.6-201ENST00000604632 637 ntBASIC23.14■■□□□ 1.29
U2AF1L4Q8WU68 MIR6786-201ENST00000616843 113 ntBASIC23.14■■□□□ 1.29
U2AF1L4Q8WU68 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC23.14■■□□□ 1.29
U2AF1L4Q8WU68 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
U2AF1L4Q8WU68 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
U2AF1L4Q8WU68 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
U2AF1L4Q8WU68 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
U2AF1L4Q8WU68 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC23.13■■□□□ 1.29
U2AF1L4Q8WU68 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
U2AF1L4Q8WU68 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
U2AF1L4Q8WU68 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC23.13■■□□□ 1.29
U2AF1L4Q8WU68 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
U2AF1L4Q8WU68 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
U2AF1L4Q8WU68 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
U2AF1L4Q8WU68 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
U2AF1L4Q8WU68 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
U2AF1L4Q8WU68 SAPCD2P4-201ENST00000424595 1171 ntBASIC23.13■■□□□ 1.29
U2AF1L4Q8WU68 AL355355.2-201ENST00000442321 338 ntBASIC23.13■■□□□ 1.29
U2AF1L4Q8WU68 NME3-204ENST00000563498 920 ntTSL 2 BASIC23.13■■□□□ 1.29
U2AF1L4Q8WU68 WDR88-203ENST00000592765 651 ntTSL 5 BASIC23.13■■□□□ 1.29
U2AF1L4Q8WU68 BRWD1-AS2-201ENST00000603064 1028 ntBASIC23.13■■□□□ 1.29
U2AF1L4Q8WU68 AC006557.6-201ENST00000623071 864 ntBASIC23.13■■□□□ 1.29
U2AF1L4Q8WU68 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
U2AF1L4Q8WU68 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
U2AF1L4Q8WU68 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
U2AF1L4Q8WU68 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.13■■□□□ 1.29
U2AF1L4Q8WU68 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
U2AF1L4Q8WU68 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
U2AF1L4Q8WU68 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
U2AF1L4Q8WU68 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
U2AF1L4Q8WU68 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC23.12■■□□□ 1.29
U2AF1L4Q8WU68 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC23.12■■□□□ 1.29
U2AF1L4Q8WU68 GRAP-204ENST00000573099 846 ntTSL 3 BASIC23.12■■□□□ 1.29
U2AF1L4Q8WU68 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC23.12■■□□□ 1.29
U2AF1L4Q8WU68 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC23.12■■□□□ 1.29
U2AF1L4Q8WU68 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
U2AF1L4Q8WU68 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC23.11■■□□□ 1.29
U2AF1L4Q8WU68 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
U2AF1L4Q8WU68 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
U2AF1L4Q8WU68 AC005521.1-201ENST00000393351 872 ntBASIC23.11■■□□□ 1.29
U2AF1L4Q8WU68 CRAT-202ENST00000393384 973 ntTSL 2 BASIC23.11■■□□□ 1.29
U2AF1L4Q8WU68 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC23.11■■□□□ 1.29
U2AF1L4Q8WU68 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC23.11■■□□□ 1.29
U2AF1L4Q8WU68 AC005829.2-201ENST00000571422 1056 ntBASIC23.11■■□□□ 1.29
U2AF1L4Q8WU68 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
U2AF1L4Q8WU68 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
U2AF1L4Q8WU68 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC23.11■■□□□ 1.29
U2AF1L4Q8WU68 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
U2AF1L4Q8WU68 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
U2AF1L4Q8WU68 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
U2AF1L4Q8WU68 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
U2AF1L4Q8WU68 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
U2AF1L4Q8WU68 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
U2AF1L4Q8WU68 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC23.1■■□□□ 1.29
U2AF1L4Q8WU68 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC23.1■■□□□ 1.29
U2AF1L4Q8WU68 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC23.1■■□□□ 1.29
U2AF1L4Q8WU68 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
U2AF1L4Q8WU68 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC23.1■■□□□ 1.29
U2AF1L4Q8WU68 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
U2AF1L4Q8WU68 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms