Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SHKBP1Q8TBC3 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SHKBP1Q8TBC3 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
SHKBP1Q8TBC3 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SHKBP1Q8TBC3 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.26■□□□□ 0.99
SHKBP1Q8TBC3 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SHKBP1Q8TBC3 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
SHKBP1Q8TBC3 MTDHP1-201ENST00000605323 784 ntBASIC21.26■□□□□ 0.99
SHKBP1Q8TBC3 AC120498.8-201ENST00000614275 531 ntBASIC21.26■□□□□ 0.99
SHKBP1Q8TBC3 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SHKBP1Q8TBC3 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SHKBP1Q8TBC3 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.26■□□□□ 0.99
SHKBP1Q8TBC3 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SHKBP1Q8TBC3 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SHKBP1Q8TBC3 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SHKBP1Q8TBC3 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SHKBP1Q8TBC3 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SHKBP1Q8TBC3 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
SHKBP1Q8TBC3 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.26■□□□□ 0.99
SHKBP1Q8TBC3 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SHKBP1Q8TBC3 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SHKBP1Q8TBC3 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
SHKBP1Q8TBC3 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.25■□□□□ 0.99
SHKBP1Q8TBC3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SHKBP1Q8TBC3 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SHKBP1Q8TBC3 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.25■□□□□ 0.99
SHKBP1Q8TBC3 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.25■□□□□ 0.99
SHKBP1Q8TBC3 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SHKBP1Q8TBC3 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SHKBP1Q8TBC3 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SHKBP1Q8TBC3 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
SHKBP1Q8TBC3 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
SHKBP1Q8TBC3 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.25■□□□□ 0.99
SHKBP1Q8TBC3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SHKBP1Q8TBC3 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.25■□□□□ 0.99
SHKBP1Q8TBC3 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SHKBP1Q8TBC3 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SHKBP1Q8TBC3 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SHKBP1Q8TBC3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SHKBP1Q8TBC3 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
SHKBP1Q8TBC3 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SHKBP1Q8TBC3 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.24■□□□□ 0.99
SHKBP1Q8TBC3 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SHKBP1Q8TBC3 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SHKBP1Q8TBC3 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
SHKBP1Q8TBC3 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SHKBP1Q8TBC3 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SHKBP1Q8TBC3 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SHKBP1Q8TBC3 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.24■□□□□ 0.99
SHKBP1Q8TBC3 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SHKBP1Q8TBC3 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SHKBP1Q8TBC3 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.24■□□□□ 0.99
SHKBP1Q8TBC3 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SHKBP1Q8TBC3 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.24■□□□□ 0.99
SHKBP1Q8TBC3 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
SHKBP1Q8TBC3 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
SHKBP1Q8TBC3 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.24■□□□□ 0.99
SHKBP1Q8TBC3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SHKBP1Q8TBC3 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SHKBP1Q8TBC3 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SHKBP1Q8TBC3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SHKBP1Q8TBC3 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.23■□□□□ 0.99
SHKBP1Q8TBC3 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.23■□□□□ 0.99
SHKBP1Q8TBC3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.23■□□□□ 0.99
SHKBP1Q8TBC3 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SHKBP1Q8TBC3 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SHKBP1Q8TBC3 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SHKBP1Q8TBC3 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
SHKBP1Q8TBC3 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.23■□□□□ 0.99
SHKBP1Q8TBC3 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.23■□□□□ 0.99
SHKBP1Q8TBC3 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.23■□□□□ 0.99
SHKBP1Q8TBC3 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.23■□□□□ 0.99
SHKBP1Q8TBC3 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SHKBP1Q8TBC3 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.23■□□□□ 0.99
SHKBP1Q8TBC3 MIR4497-201ENST00000583208 89 ntBASIC21.23■□□□□ 0.99
SHKBP1Q8TBC3 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.23■□□□□ 0.99
SHKBP1Q8TBC3 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
SHKBP1Q8TBC3 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SHKBP1Q8TBC3 AC244015.2-201ENST00000616358 1861 ntBASIC21.23■□□□□ 0.99
SHKBP1Q8TBC3 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SHKBP1Q8TBC3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SHKBP1Q8TBC3 AC011484.1-201ENST00000377652 1995 ntBASIC21.23■□□□□ 0.99
SHKBP1Q8TBC3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.23■□□□□ 0.99
SHKBP1Q8TBC3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.23■□□□□ 0.99
SHKBP1Q8TBC3 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SHKBP1Q8TBC3 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SHKBP1Q8TBC3 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SHKBP1Q8TBC3 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.22■□□□□ 0.99
SHKBP1Q8TBC3 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SHKBP1Q8TBC3 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SHKBP1Q8TBC3 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.22■□□□□ 0.99
SHKBP1Q8TBC3 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.22■□□□□ 0.99
SHKBP1Q8TBC3 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.22■□□□□ 0.99
SHKBP1Q8TBC3 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.22■□□□□ 0.99
SHKBP1Q8TBC3 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SHKBP1Q8TBC3 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.22■□□□□ 0.99
SHKBP1Q8TBC3 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SHKBP1Q8TBC3 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
SHKBP1Q8TBC3 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.22■□□□□ 0.99
SHKBP1Q8TBC3 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms