Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.75■■□□□ 1.07
LMO3Q8TAP4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.75■■□□□ 1.07
LMO3Q8TAP4 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
LMO3Q8TAP4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LMO3Q8TAP4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LMO3Q8TAP4 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
LMO3Q8TAP4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LMO3Q8TAP4 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
LMO3Q8TAP4 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
LMO3Q8TAP4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LMO3Q8TAP4 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LMO3Q8TAP4 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
LMO3Q8TAP4 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LMO3Q8TAP4 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
LMO3Q8TAP4 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
LMO3Q8TAP4 PCDHAC2-203ENST00000615316 3011 ntBASIC21.74■■□□□ 1.07
LMO3Q8TAP4 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LMO3Q8TAP4 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LMO3Q8TAP4 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
LMO3Q8TAP4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.74■■□□□ 1.07
LMO3Q8TAP4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LMO3Q8TAP4 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.74■■□□□ 1.07
LMO3Q8TAP4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.74■■□□□ 1.07
LMO3Q8TAP4 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
LMO3Q8TAP4 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
LMO3Q8TAP4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
LMO3Q8TAP4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
LMO3Q8TAP4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LMO3Q8TAP4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
LMO3Q8TAP4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.74■■□□□ 1.07
LMO3Q8TAP4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.74■■□□□ 1.07
LMO3Q8TAP4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.74■■□□□ 1.07
LMO3Q8TAP4 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LMO3Q8TAP4 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.73■■□□□ 1.07
LMO3Q8TAP4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LMO3Q8TAP4 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.73■■□□□ 1.07
LMO3Q8TAP4 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LMO3Q8TAP4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.73■■□□□ 1.07
LMO3Q8TAP4 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LMO3Q8TAP4 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.73■■□□□ 1.07
LMO3Q8TAP4 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
LMO3Q8TAP4 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.73■■□□□ 1.07
LMO3Q8TAP4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.73■■□□□ 1.07
LMO3Q8TAP4 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LMO3Q8TAP4 BX119927.1-201ENST00000636596 1552 ntBASIC21.73■■□□□ 1.07
LMO3Q8TAP4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
LMO3Q8TAP4 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LMO3Q8TAP4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
LMO3Q8TAP4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.72■■□□□ 1.07
LMO3Q8TAP4 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LMO3Q8TAP4 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
LMO3Q8TAP4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
LMO3Q8TAP4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LMO3Q8TAP4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.72■■□□□ 1.07
LMO3Q8TAP4 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LMO3Q8TAP4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
LMO3Q8TAP4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.72■■□□□ 1.07
LMO3Q8TAP4 AF201337.1-201ENST00000520239 748 ntBASIC21.72■■□□□ 1.07
LMO3Q8TAP4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
LMO3Q8TAP4 AC105036.2-201ENST00000569468 176 ntBASIC21.72■■□□□ 1.07
LMO3Q8TAP4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LMO3Q8TAP4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LMO3Q8TAP4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LMO3Q8TAP4 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LMO3Q8TAP4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
LMO3Q8TAP4 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LMO3Q8TAP4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.71■■□□□ 1.07
LMO3Q8TAP4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.71■■□□□ 1.07
LMO3Q8TAP4 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.71■■□□□ 1.07
LMO3Q8TAP4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LMO3Q8TAP4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.71■■□□□ 1.07
LMO3Q8TAP4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.71■■□□□ 1.07
LMO3Q8TAP4 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.71■■□□□ 1.07
LMO3Q8TAP4 AC092666.2-201ENST00000613287 246 ntBASIC21.71■■□□□ 1.07
LMO3Q8TAP4 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.71■■□□□ 1.07
LMO3Q8TAP4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.07
LMO3Q8TAP4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LMO3Q8TAP4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
LMO3Q8TAP4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
LMO3Q8TAP4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
LMO3Q8TAP4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
LMO3Q8TAP4 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LMO3Q8TAP4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
LMO3Q8TAP4 AL589743.5-201ENST00000616611 1050 ntBASIC21.7■■□□□ 1.06
LMO3Q8TAP4 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LMO3Q8TAP4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LMO3Q8TAP4 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LMO3Q8TAP4 AL691432.2-201ENST00000607222 2038 ntBASIC21.7■■□□□ 1.06
LMO3Q8TAP4 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
LMO3Q8TAP4 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LMO3Q8TAP4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
LMO3Q8TAP4 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LMO3Q8TAP4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.69■■□□□ 1.06
LMO3Q8TAP4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LMO3Q8TAP4 GUSBP6-202ENST00000438529 1198 ntBASIC21.69■■□□□ 1.06
LMO3Q8TAP4 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.69■■□□□ 1.06
LMO3Q8TAP4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.69■■□□□ 1.06
LMO3Q8TAP4 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
LMO3Q8TAP4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LMO3Q8TAP4 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms