Protein–RNA interactions for Protein: Q8ND90

PNMA1, Paraneoplastic antigen Ma1, humanhuman

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA1Q8ND90 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC23.55■■□□□ 1.36
PNMA1Q8ND90 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
PNMA1Q8ND90 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC23.55■■□□□ 1.36
PNMA1Q8ND90 UNC93B4-201ENST00000505679 747 ntBASIC23.55■■□□□ 1.36
PNMA1Q8ND90 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PNMA1Q8ND90 ADM-205ENST00000528544 586 ntTSL 2 BASIC23.55■■□□□ 1.36
PNMA1Q8ND90 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC23.55■■□□□ 1.36
PNMA1Q8ND90 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
PNMA1Q8ND90 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC23.55■■□□□ 1.36
PNMA1Q8ND90 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PNMA1Q8ND90 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
PNMA1Q8ND90 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PNMA1Q8ND90 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PNMA1Q8ND90 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PNMA1Q8ND90 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PNMA1Q8ND90 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
PNMA1Q8ND90 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PNMA1Q8ND90 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PNMA1Q8ND90 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
PNMA1Q8ND90 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC23.54■■□□□ 1.36
PNMA1Q8ND90 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PNMA1Q8ND90 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC23.54■■□□□ 1.36
PNMA1Q8ND90 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PNMA1Q8ND90 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PNMA1Q8ND90 H19-201ENST00000411754 1788 ntTSL 5 BASIC23.54■■□□□ 1.36
PNMA1Q8ND90 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PNMA1Q8ND90 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
PNMA1Q8ND90 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PNMA1Q8ND90 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PNMA1Q8ND90 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PNMA1Q8ND90 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
PNMA1Q8ND90 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PNMA1Q8ND90 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
PNMA1Q8ND90 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PNMA1Q8ND90 AC023632.3-201ENST00000521633 145 ntBASIC23.53■■□□□ 1.36
PNMA1Q8ND90 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
PNMA1Q8ND90 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PNMA1Q8ND90 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PNMA1Q8ND90 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PNMA1Q8ND90 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
PNMA1Q8ND90 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PNMA1Q8ND90 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PNMA1Q8ND90 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PNMA1Q8ND90 DPP3P2-201ENST00000416030 1696 ntBASIC23.52■■□□□ 1.36
PNMA1Q8ND90 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PNMA1Q8ND90 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PNMA1Q8ND90 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
PNMA1Q8ND90 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PNMA1Q8ND90 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC23.52■■□□□ 1.36
PNMA1Q8ND90 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PNMA1Q8ND90 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
PNMA1Q8ND90 AC006557.6-201ENST00000623071 864 ntBASIC23.52■■□□□ 1.36
PNMA1Q8ND90 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
PNMA1Q8ND90 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC23.52■■□□□ 1.36
PNMA1Q8ND90 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC23.52■■□□□ 1.36
PNMA1Q8ND90 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC23.51■■□□□ 1.35
PNMA1Q8ND90 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PNMA1Q8ND90 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PNMA1Q8ND90 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PNMA1Q8ND90 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
PNMA1Q8ND90 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
PNMA1Q8ND90 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC23.51■■□□□ 1.35
PNMA1Q8ND90 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PNMA1Q8ND90 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC23.51■■□□□ 1.35
PNMA1Q8ND90 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PNMA1Q8ND90 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PNMA1Q8ND90 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC23.51■■□□□ 1.35
PNMA1Q8ND90 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC23.51■■□□□ 1.35
PNMA1Q8ND90 KLF2-202ENST00000592003 564 ntTSL 3 BASIC23.51■■□□□ 1.35
PNMA1Q8ND90 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC23.51■■□□□ 1.35
PNMA1Q8ND90 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC23.51■■□□□ 1.35
PNMA1Q8ND90 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PNMA1Q8ND90 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PNMA1Q8ND90 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC23.51■■□□□ 1.35
PNMA1Q8ND90 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PNMA1Q8ND90 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
PNMA1Q8ND90 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
PNMA1Q8ND90 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PNMA1Q8ND90 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PNMA1Q8ND90 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
PNMA1Q8ND90 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PNMA1Q8ND90 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PNMA1Q8ND90 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PNMA1Q8ND90 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC23.5■■□□□ 1.35
PNMA1Q8ND90 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC23.5■■□□□ 1.35
PNMA1Q8ND90 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC23.5■■□□□ 1.35
PNMA1Q8ND90 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
PNMA1Q8ND90 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PNMA1Q8ND90 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC23.5■■□□□ 1.35
PNMA1Q8ND90 AL390719.1-204ENST00000412397 1219 ntBASIC23.5■■□□□ 1.35
PNMA1Q8ND90 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PNMA1Q8ND90 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC23.5■■□□□ 1.35
PNMA1Q8ND90 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PNMA1Q8ND90 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC23.5■■□□□ 1.35
PNMA1Q8ND90 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC23.5■■□□□ 1.35
PNMA1Q8ND90 AC006058.3-201ENST00000606217 1069 ntBASIC23.5■■□□□ 1.35
PNMA1Q8ND90 ITM2C-210ENST00000620962 501 ntBASIC23.5■■□□□ 1.35
PNMA1Q8ND90 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PNMA1Q8ND90 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PNMA1Q8ND90 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms