Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LINC01555Q8NAE3 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LINC01555Q8NAE3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
LINC01555Q8NAE3 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LINC01555Q8NAE3 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.49■□□□□ 0.71
LINC01555Q8NAE3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LINC01555Q8NAE3 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LINC01555Q8NAE3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LINC01555Q8NAE3 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
LINC01555Q8NAE3 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LINC01555Q8NAE3 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.49■□□□□ 0.71
LINC01555Q8NAE3 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LINC01555Q8NAE3 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.49■□□□□ 0.71
LINC01555Q8NAE3 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
LINC01555Q8NAE3 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.49■□□□□ 0.71
LINC01555Q8NAE3 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.49■□□□□ 0.71
LINC01555Q8NAE3 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
LINC01555Q8NAE3 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LINC01555Q8NAE3 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
LINC01555Q8NAE3 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LINC01555Q8NAE3 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.49■□□□□ 0.71
LINC01555Q8NAE3 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.49■□□□□ 0.71
LINC01555Q8NAE3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LINC01555Q8NAE3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
LINC01555Q8NAE3 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LINC01555Q8NAE3 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LINC01555Q8NAE3 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LINC01555Q8NAE3 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LINC01555Q8NAE3 AC092368.3-202ENST00000574180 1591 ntBASIC19.49■□□□□ 0.71
LINC01555Q8NAE3 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LINC01555Q8NAE3 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.49■□□□□ 0.71
LINC01555Q8NAE3 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LINC01555Q8NAE3 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
LINC01555Q8NAE3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LINC01555Q8NAE3 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LINC01555Q8NAE3 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LINC01555Q8NAE3 PNMA6B-201ENST00000538162 1200 ntBASIC19.48■□□□□ 0.71
LINC01555Q8NAE3 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.48■□□□□ 0.71
LINC01555Q8NAE3 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.48■□□□□ 0.71
LINC01555Q8NAE3 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LINC01555Q8NAE3 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LINC01555Q8NAE3 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LINC01555Q8NAE3 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LINC01555Q8NAE3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
LINC01555Q8NAE3 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LINC01555Q8NAE3 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
LINC01555Q8NAE3 SMG8-203ENST00000578922 2178 ntBASIC19.47■□□□□ 0.71
LINC01555Q8NAE3 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
LINC01555Q8NAE3 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
LINC01555Q8NAE3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
LINC01555Q8NAE3 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
LINC01555Q8NAE3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LINC01555Q8NAE3 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LINC01555Q8NAE3 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LINC01555Q8NAE3 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
LINC01555Q8NAE3 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LINC01555Q8NAE3 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.47■□□□□ 0.71
LINC01555Q8NAE3 MIR4651-201ENST00000582622 73 ntBASIC19.47■□□□□ 0.71
LINC01555Q8NAE3 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LINC01555Q8NAE3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.47■□□□□ 0.71
LINC01555Q8NAE3 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.47■□□□□ 0.71
LINC01555Q8NAE3 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LINC01555Q8NAE3 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LINC01555Q8NAE3 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LINC01555Q8NAE3 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LINC01555Q8NAE3 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.46■□□□□ 0.71
LINC01555Q8NAE3 GABARAPL3-202ENST00000624044 1851 ntBASIC19.46■□□□□ 0.71
LINC01555Q8NAE3 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LINC01555Q8NAE3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.46■□□□□ 0.71
LINC01555Q8NAE3 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LINC01555Q8NAE3 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.46■□□□□ 0.71
LINC01555Q8NAE3 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LINC01555Q8NAE3 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
LINC01555Q8NAE3 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.46■□□□□ 0.71
LINC01555Q8NAE3 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
LINC01555Q8NAE3 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
LINC01555Q8NAE3 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LINC01555Q8NAE3 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LINC01555Q8NAE3 LINC01006-201ENST00000333319 2292 ntBASIC19.46■□□□□ 0.71
LINC01555Q8NAE3 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LINC01555Q8NAE3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LINC01555Q8NAE3 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
LINC01555Q8NAE3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LINC01555Q8NAE3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
LINC01555Q8NAE3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.45■□□□□ 0.7
LINC01555Q8NAE3 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.45■□□□□ 0.7
LINC01555Q8NAE3 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.45■□□□□ 0.7
LINC01555Q8NAE3 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LINC01555Q8NAE3 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.45■□□□□ 0.7
LINC01555Q8NAE3 UNC93B5-201ENST00000530315 699 ntBASIC19.45■□□□□ 0.7
LINC01555Q8NAE3 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.45■□□□□ 0.7
LINC01555Q8NAE3 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.45■□□□□ 0.7
LINC01555Q8NAE3 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LINC01555Q8NAE3 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LINC01555Q8NAE3 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LINC01555Q8NAE3 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.45■□□□□ 0.7
LINC01555Q8NAE3 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.45■□□□□ 0.7
LINC01555Q8NAE3 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LINC01555Q8NAE3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LINC01555Q8NAE3 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms