Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL27A1Q8IZC6 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL27A1Q8IZC6 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.23■□□□□ 0.67
COL27A1Q8IZC6 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL27A1Q8IZC6 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL27A1Q8IZC6 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL27A1Q8IZC6 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL27A1Q8IZC6 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL27A1Q8IZC6 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.22■□□□□ 0.67
COL27A1Q8IZC6 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL27A1Q8IZC6 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL27A1Q8IZC6 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL27A1Q8IZC6 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.22■□□□□ 0.67
COL27A1Q8IZC6 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL27A1Q8IZC6 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
COL27A1Q8IZC6 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL27A1Q8IZC6 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
COL27A1Q8IZC6 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL27A1Q8IZC6 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.22■□□□□ 0.67
COL27A1Q8IZC6 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.22■□□□□ 0.67
COL27A1Q8IZC6 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
COL27A1Q8IZC6 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
COL27A1Q8IZC6 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL27A1Q8IZC6 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.22■□□□□ 0.67
COL27A1Q8IZC6 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.22■□□□□ 0.67
COL27A1Q8IZC6 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COL27A1Q8IZC6 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.21■□□□□ 0.67
COL27A1Q8IZC6 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.21■□□□□ 0.67
COL27A1Q8IZC6 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
COL27A1Q8IZC6 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL27A1Q8IZC6 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL27A1Q8IZC6 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL27A1Q8IZC6 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL27A1Q8IZC6 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL27A1Q8IZC6 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.21■□□□□ 0.67
COL27A1Q8IZC6 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COL27A1Q8IZC6 AC145285.6-201ENST00000604632 637 ntBASIC19.21■□□□□ 0.67
COL27A1Q8IZC6 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL27A1Q8IZC6 NIFKP9-201ENST00000419265 221 ntBASIC19.2■□□□□ 0.66
COL27A1Q8IZC6 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
COL27A1Q8IZC6 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.2■□□□□ 0.66
COL27A1Q8IZC6 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.2■□□□□ 0.66
COL27A1Q8IZC6 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.2■□□□□ 0.66
COL27A1Q8IZC6 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.2■□□□□ 0.66
COL27A1Q8IZC6 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL27A1Q8IZC6 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COL27A1Q8IZC6 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.2■□□□□ 0.66
COL27A1Q8IZC6 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL27A1Q8IZC6 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.2■□□□□ 0.66
COL27A1Q8IZC6 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.2■□□□□ 0.66
COL27A1Q8IZC6 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.2■□□□□ 0.66
COL27A1Q8IZC6 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
COL27A1Q8IZC6 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
COL27A1Q8IZC6 AC113347.1-201ENST00000413321 391 ntBASIC19.2■□□□□ 0.66
COL27A1Q8IZC6 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL27A1Q8IZC6 AC116562.2-201ENST00000507042 360 ntBASIC19.2■□□□□ 0.66
COL27A1Q8IZC6 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.2■□□□□ 0.66
COL27A1Q8IZC6 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COL27A1Q8IZC6 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL27A1Q8IZC6 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL27A1Q8IZC6 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL27A1Q8IZC6 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
COL27A1Q8IZC6 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.19■□□□□ 0.66
COL27A1Q8IZC6 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL27A1Q8IZC6 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL27A1Q8IZC6 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.19■□□□□ 0.66
COL27A1Q8IZC6 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
COL27A1Q8IZC6 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL27A1Q8IZC6 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL27A1Q8IZC6 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.19■□□□□ 0.66
COL27A1Q8IZC6 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.19■□□□□ 0.66
COL27A1Q8IZC6 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
COL27A1Q8IZC6 AC092865.7-201ENST00000641832 219 ntBASIC19.19■□□□□ 0.66
COL27A1Q8IZC6 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL27A1Q8IZC6 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.19■□□□□ 0.66
COL27A1Q8IZC6 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL27A1Q8IZC6 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.18■□□□□ 0.66
COL27A1Q8IZC6 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COL27A1Q8IZC6 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL27A1Q8IZC6 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.18■□□□□ 0.66
COL27A1Q8IZC6 AL031963.3-201ENST00000606441 850 ntBASIC19.18■□□□□ 0.66
COL27A1Q8IZC6 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
COL27A1Q8IZC6 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.18■□□□□ 0.66
COL27A1Q8IZC6 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL27A1Q8IZC6 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.18■□□□□ 0.66
COL27A1Q8IZC6 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL27A1Q8IZC6 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.18■□□□□ 0.66
COL27A1Q8IZC6 AC244015.2-201ENST00000616358 1861 ntBASIC19.18■□□□□ 0.66
COL27A1Q8IZC6 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL27A1Q8IZC6 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.18■□□□□ 0.66
COL27A1Q8IZC6 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COL27A1Q8IZC6 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COL27A1Q8IZC6 MMP23A-201ENST00000234610 1017 ntBASIC19.18■□□□□ 0.66
COL27A1Q8IZC6 UNC93B2-201ENST00000285383 730 ntBASIC19.18■□□□□ 0.66
COL27A1Q8IZC6 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL27A1Q8IZC6 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.18■□□□□ 0.66
COL27A1Q8IZC6 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL27A1Q8IZC6 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL27A1Q8IZC6 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.18■□□□□ 0.66
COL27A1Q8IZC6 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms