Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
SCXQ7RTU7 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SCXQ7RTU7 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SCXQ7RTU7 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SCXQ7RTU7 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SCXQ7RTU7 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SCXQ7RTU7 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SCXQ7RTU7 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC13.31□□□□□ -0.28
SCXQ7RTU7 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SCXQ7RTU7 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC13.31□□□□□ -0.28
SCXQ7RTU7 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SCXQ7RTU7 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SCXQ7RTU7 RBM17P2-201ENST00000616397 1405 ntBASIC13.3□□□□□ -0.28
SCXQ7RTU7 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SCXQ7RTU7 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC13.3□□□□□ -0.28
SCXQ7RTU7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SCXQ7RTU7 AC003102.1-202ENST00000563394 1796 ntBASIC13.3□□□□□ -0.28
SCXQ7RTU7 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SCXQ7RTU7 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SCXQ7RTU7 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SCXQ7RTU7 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC13.3□□□□□ -0.28
SCXQ7RTU7 AC061975.6-201ENST00000579045 1553 ntBASIC13.3□□□□□ -0.28
SCXQ7RTU7 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SCXQ7RTU7 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SCXQ7RTU7 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
SCXQ7RTU7 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC13.3□□□□□ -0.28
SCXQ7RTU7 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
SCXQ7RTU7 PPP1R14BP2-201ENST00000426284 444 ntBASIC13.3□□□□□ -0.28
SCXQ7RTU7 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC13.3□□□□□ -0.28
SCXQ7RTU7 FAM201B-201ENST00000458407 597 ntBASIC13.3□□□□□ -0.28
SCXQ7RTU7 RNA5SP413-201ENST00000516373 109 ntBASIC13.3□□□□□ -0.28
SCXQ7RTU7 MARS-234ENST00000630571 216 ntTSL 5 BASIC13.3□□□□□ -0.28
SCXQ7RTU7 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SCXQ7RTU7 MARS-235ENST00000630803 183 ntTSL 3 BASIC13.3□□□□□ -0.28
SCXQ7RTU7 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SCXQ7RTU7 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
SCXQ7RTU7 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SCXQ7RTU7 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC13.3□□□□□ -0.28
SCXQ7RTU7 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
SCXQ7RTU7 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
SCXQ7RTU7 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SCXQ7RTU7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC13.3□□□□□ -0.28
SCXQ7RTU7 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC13.3□□□□□ -0.28
SCXQ7RTU7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC13.3□□□□□ -0.28
SCXQ7RTU7 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SCXQ7RTU7 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
SCXQ7RTU7 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC13.29□□□□□ -0.28
SCXQ7RTU7 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SCXQ7RTU7 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SCXQ7RTU7 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SCXQ7RTU7 AC080038.3-201ENST00000623346 1952 ntBASIC13.29□□□□□ -0.28
SCXQ7RTU7 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SCXQ7RTU7 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SCXQ7RTU7 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SCXQ7RTU7 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC13.29□□□□□ -0.28
SCXQ7RTU7 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SCXQ7RTU7 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC13.29□□□□□ -0.28
SCXQ7RTU7 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SCXQ7RTU7 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC13.29□□□□□ -0.28
SCXQ7RTU7 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SCXQ7RTU7 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC13.29□□□□□ -0.28
SCXQ7RTU7 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC13.29□□□□□ -0.28
SCXQ7RTU7 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC13.29□□□□□ -0.28
SCXQ7RTU7 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SCXQ7RTU7 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC13.29□□□□□ -0.28
SCXQ7RTU7 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
SCXQ7RTU7 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SCXQ7RTU7 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SCXQ7RTU7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC13.29□□□□□ -0.28
SCXQ7RTU7 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
SCXQ7RTU7 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
SCXQ7RTU7 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SCXQ7RTU7 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SCXQ7RTU7 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC13.29□□□□□ -0.28
SCXQ7RTU7 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SCXQ7RTU7 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SCXQ7RTU7 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SCXQ7RTU7 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC13.28□□□□□ -0.28
SCXQ7RTU7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC13.28□□□□□ -0.28
SCXQ7RTU7 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC13.28□□□□□ -0.28
SCXQ7RTU7 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SCXQ7RTU7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SCXQ7RTU7 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SCXQ7RTU7 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SCXQ7RTU7 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SCXQ7RTU7 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SCXQ7RTU7 AL512625.2-201ENST00000417533 625 ntBASIC13.28□□□□□ -0.28
SCXQ7RTU7 BX276092.2-201ENST00000417668 665 ntBASIC13.28□□□□□ -0.28
SCXQ7RTU7 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC13.28□□□□□ -0.28
SCXQ7RTU7 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SCXQ7RTU7 ISCU-212ENST00000547005 795 ntTSL 3 BASIC13.28□□□□□ -0.28
SCXQ7RTU7 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SCXQ7RTU7 AL591742.1-201ENST00000604433 565 ntBASIC13.28□□□□□ -0.28
SCXQ7RTU7 AC092118.2-201ENST00000613495 667 ntBASIC13.28□□□□□ -0.28
SCXQ7RTU7 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
SCXQ7RTU7 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SCXQ7RTU7 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
SCXQ7RTU7 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC13.28□□□□□ -0.28
SCXQ7RTU7 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SCXQ7RTU7 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms