Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.44■□□□□ 0.38
COLCA1Q6ZS62 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COLCA1Q6ZS62 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.44■□□□□ 0.38
COLCA1Q6ZS62 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COLCA1Q6ZS62 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COLCA1Q6ZS62 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
COLCA1Q6ZS62 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COLCA1Q6ZS62 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.44■□□□□ 0.38
COLCA1Q6ZS62 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COLCA1Q6ZS62 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.44■□□□□ 0.38
COLCA1Q6ZS62 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
COLCA1Q6ZS62 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.44■□□□□ 0.38
COLCA1Q6ZS62 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COLCA1Q6ZS62 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
COLCA1Q6ZS62 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
COLCA1Q6ZS62 MKRN4P-201ENST00000444706 1521 ntBASIC17.43■□□□□ 0.38
COLCA1Q6ZS62 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.43■□□□□ 0.38
COLCA1Q6ZS62 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COLCA1Q6ZS62 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
COLCA1Q6ZS62 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COLCA1Q6ZS62 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
COLCA1Q6ZS62 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COLCA1Q6ZS62 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
COLCA1Q6ZS62 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
COLCA1Q6ZS62 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.43■□□□□ 0.38
COLCA1Q6ZS62 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.43■□□□□ 0.38
COLCA1Q6ZS62 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.43■□□□□ 0.38
COLCA1Q6ZS62 AL121832.2-201ENST00000610979 668 ntBASIC17.43■□□□□ 0.38
COLCA1Q6ZS62 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COLCA1Q6ZS62 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
COLCA1Q6ZS62 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
COLCA1Q6ZS62 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
COLCA1Q6ZS62 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.43■□□□□ 0.38
COLCA1Q6ZS62 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.43■□□□□ 0.38
COLCA1Q6ZS62 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
COLCA1Q6ZS62 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
COLCA1Q6ZS62 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COLCA1Q6ZS62 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.42■□□□□ 0.38
COLCA1Q6ZS62 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COLCA1Q6ZS62 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COLCA1Q6ZS62 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COLCA1Q6ZS62 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COLCA1Q6ZS62 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.42■□□□□ 0.38
COLCA1Q6ZS62 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COLCA1Q6ZS62 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
COLCA1Q6ZS62 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
COLCA1Q6ZS62 NCF1B-203ENST00000435988 1254 ntBASIC17.42■□□□□ 0.38
COLCA1Q6ZS62 AC006970.2-201ENST00000450065 779 ntBASIC17.42■□□□□ 0.38
COLCA1Q6ZS62 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.42■□□□□ 0.38
COLCA1Q6ZS62 AC083906.2-201ENST00000511578 360 ntBASIC17.42■□□□□ 0.38
COLCA1Q6ZS62 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.42■□□□□ 0.38
COLCA1Q6ZS62 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.42■□□□□ 0.38
COLCA1Q6ZS62 C2orf69P4-201ENST00000565394 541 ntBASIC17.42■□□□□ 0.38
COLCA1Q6ZS62 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.42■□□□□ 0.38
COLCA1Q6ZS62 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COLCA1Q6ZS62 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.42■□□□□ 0.38
COLCA1Q6ZS62 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
COLCA1Q6ZS62 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COLCA1Q6ZS62 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COLCA1Q6ZS62 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.42■□□□□ 0.38
COLCA1Q6ZS62 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
COLCA1Q6ZS62 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COLCA1Q6ZS62 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
COLCA1Q6ZS62 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COLCA1Q6ZS62 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
COLCA1Q6ZS62 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COLCA1Q6ZS62 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COLCA1Q6ZS62 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COLCA1Q6ZS62 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COLCA1Q6ZS62 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.41■□□□□ 0.38
COLCA1Q6ZS62 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.41■□□□□ 0.38
COLCA1Q6ZS62 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.41■□□□□ 0.38
COLCA1Q6ZS62 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.41■□□□□ 0.38
COLCA1Q6ZS62 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.41■□□□□ 0.38
COLCA1Q6ZS62 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.41■□□□□ 0.38
COLCA1Q6ZS62 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.41■□□□□ 0.38
COLCA1Q6ZS62 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.41■□□□□ 0.38
COLCA1Q6ZS62 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COLCA1Q6ZS62 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.41■□□□□ 0.38
COLCA1Q6ZS62 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
COLCA1Q6ZS62 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COLCA1Q6ZS62 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COLCA1Q6ZS62 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
COLCA1Q6ZS62 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.4■□□□□ 0.38
COLCA1Q6ZS62 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.4■□□□□ 0.38
COLCA1Q6ZS62 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.4■□□□□ 0.38
COLCA1Q6ZS62 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COLCA1Q6ZS62 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COLCA1Q6ZS62 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COLCA1Q6ZS62 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.4■□□□□ 0.38
COLCA1Q6ZS62 BX119927.1-201ENST00000636596 1552 ntBASIC17.4■□□□□ 0.38
COLCA1Q6ZS62 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
COLCA1Q6ZS62 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.39■□□□□ 0.38
COLCA1Q6ZS62 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.39■□□□□ 0.38
COLCA1Q6ZS62 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.39■□□□□ 0.38
COLCA1Q6ZS62 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
COLCA1Q6ZS62 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
COLCA1Q6ZS62 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
COLCA1Q6ZS62 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
COLCA1Q6ZS62 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms