Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
FOXR1Q6PIV2 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21■□□□□ 0.95
FOXR1Q6PIV2 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21■□□□□ 0.95
FOXR1Q6PIV2 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
FOXR1Q6PIV2 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FOXR1Q6PIV2 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.99■□□□□ 0.95
FOXR1Q6PIV2 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
FOXR1Q6PIV2 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
FOXR1Q6PIV2 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
FOXR1Q6PIV2 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FOXR1Q6PIV2 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FOXR1Q6PIV2 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
FOXR1Q6PIV2 AC006970.2-201ENST00000450065 779 ntBASIC20.99■□□□□ 0.95
FOXR1Q6PIV2 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.99■□□□□ 0.95
FOXR1Q6PIV2 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.99■□□□□ 0.95
FOXR1Q6PIV2 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.99■□□□□ 0.95
FOXR1Q6PIV2 TPRG1LP1-201ENST00000598702 760 ntBASIC20.99■□□□□ 0.95
FOXR1Q6PIV2 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
FOXR1Q6PIV2 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.99■□□□□ 0.95
FOXR1Q6PIV2 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FOXR1Q6PIV2 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FOXR1Q6PIV2 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FOXR1Q6PIV2 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
FOXR1Q6PIV2 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
FOXR1Q6PIV2 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
FOXR1Q6PIV2 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
FOXR1Q6PIV2 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
FOXR1Q6PIV2 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FOXR1Q6PIV2 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
FOXR1Q6PIV2 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
FOXR1Q6PIV2 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FOXR1Q6PIV2 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.98■□□□□ 0.95
FOXR1Q6PIV2 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FOXR1Q6PIV2 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FOXR1Q6PIV2 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
FOXR1Q6PIV2 AC125437.2-201ENST00000625180 2167 ntBASIC20.98■□□□□ 0.95
FOXR1Q6PIV2 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
FOXR1Q6PIV2 AC026185.1-201ENST00000445748 174 ntBASIC20.98■□□□□ 0.95
FOXR1Q6PIV2 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FOXR1Q6PIV2 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.98■□□□□ 0.95
FOXR1Q6PIV2 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FOXR1Q6PIV2 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
FOXR1Q6PIV2 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
FOXR1Q6PIV2 BX005040.4-201ENST00000637145 1518 ntBASIC20.98■□□□□ 0.95
FOXR1Q6PIV2 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FOXR1Q6PIV2 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FOXR1Q6PIV2 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FOXR1Q6PIV2 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
FOXR1Q6PIV2 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
FOXR1Q6PIV2 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
FOXR1Q6PIV2 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.97■□□□□ 0.95
FOXR1Q6PIV2 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FOXR1Q6PIV2 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.97■□□□□ 0.95
FOXR1Q6PIV2 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.97■□□□□ 0.95
FOXR1Q6PIV2 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
FOXR1Q6PIV2 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
FOXR1Q6PIV2 AP004607.4-201ENST00000530158 1459 ntBASIC20.97■□□□□ 0.95
FOXR1Q6PIV2 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FOXR1Q6PIV2 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FOXR1Q6PIV2 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
FOXR1Q6PIV2 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.97■□□□□ 0.95
FOXR1Q6PIV2 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.97■□□□□ 0.95
FOXR1Q6PIV2 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.97■□□□□ 0.95
FOXR1Q6PIV2 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.97■□□□□ 0.95
FOXR1Q6PIV2 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
FOXR1Q6PIV2 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
FOXR1Q6PIV2 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
FOXR1Q6PIV2 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FOXR1Q6PIV2 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
FOXR1Q6PIV2 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
FOXR1Q6PIV2 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FOXR1Q6PIV2 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.96■□□□□ 0.95
FOXR1Q6PIV2 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
FOXR1Q6PIV2 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
FOXR1Q6PIV2 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.96■□□□□ 0.95
FOXR1Q6PIV2 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FOXR1Q6PIV2 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
FOXR1Q6PIV2 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FOXR1Q6PIV2 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
FOXR1Q6PIV2 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
FOXR1Q6PIV2 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
FOXR1Q6PIV2 AL355802.2-201ENST00000402069 882 ntBASIC20.96■□□□□ 0.95
FOXR1Q6PIV2 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.96■□□□□ 0.95
FOXR1Q6PIV2 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.96■□□□□ 0.95
FOXR1Q6PIV2 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.96■□□□□ 0.95
FOXR1Q6PIV2 LTB4R2-202ENST00000528054 3092 ntBASIC20.96■□□□□ 0.95
FOXR1Q6PIV2 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.96■□□□□ 0.95
FOXR1Q6PIV2 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FOXR1Q6PIV2 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
FOXR1Q6PIV2 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
FOXR1Q6PIV2 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
FOXR1Q6PIV2 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
FOXR1Q6PIV2 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
FOXR1Q6PIV2 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FOXR1Q6PIV2 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FOXR1Q6PIV2 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
FOXR1Q6PIV2 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
FOXR1Q6PIV2 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FOXR1Q6PIV2 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FOXR1Q6PIV2 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms