Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC22.56■■□□□ 1.2
SWSAP1Q6NVH7 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC22.56■■□□□ 1.2
SWSAP1Q6NVH7 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SWSAP1Q6NVH7 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC22.56■■□□□ 1.2
SWSAP1Q6NVH7 RER1-204ENST00000378518 522 ntTSL 3 BASIC22.56■■□□□ 1.2
SWSAP1Q6NVH7 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SWSAP1Q6NVH7 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
SWSAP1Q6NVH7 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SWSAP1Q6NVH7 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
SWSAP1Q6NVH7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SWSAP1Q6NVH7 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
SWSAP1Q6NVH7 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC22.56■■□□□ 1.2
SWSAP1Q6NVH7 AC069544.1-201ENST00000609399 999 ntBASIC22.56■■□□□ 1.2
SWSAP1Q6NVH7 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
SWSAP1Q6NVH7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
SWSAP1Q6NVH7 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SWSAP1Q6NVH7 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
SWSAP1Q6NVH7 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SWSAP1Q6NVH7 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SWSAP1Q6NVH7 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SWSAP1Q6NVH7 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SWSAP1Q6NVH7 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC22.55■■□□□ 1.2
SWSAP1Q6NVH7 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
SWSAP1Q6NVH7 AL137060.1-201ENST00000618151 2648 ntBASIC22.55■■□□□ 1.2
SWSAP1Q6NVH7 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC22.55■■□□□ 1.2
SWSAP1Q6NVH7 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
SWSAP1Q6NVH7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC22.55■■□□□ 1.2
SWSAP1Q6NVH7 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SWSAP1Q6NVH7 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC22.55■■□□□ 1.2
SWSAP1Q6NVH7 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SWSAP1Q6NVH7 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC22.55■■□□□ 1.2
SWSAP1Q6NVH7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC22.55■■□□□ 1.2
SWSAP1Q6NVH7 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC22.55■■□□□ 1.2
SWSAP1Q6NVH7 DET1-205ENST00000558413 583 ntTSL 4 BASIC22.55■■□□□ 1.2
SWSAP1Q6NVH7 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC22.55■■□□□ 1.2
SWSAP1Q6NVH7 RN7SL471P-201ENST00000580476 299 ntBASIC22.55■■□□□ 1.2
SWSAP1Q6NVH7 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
SWSAP1Q6NVH7 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC22.55■■□□□ 1.2
SWSAP1Q6NVH7 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SWSAP1Q6NVH7 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC22.55■■□□□ 1.2
SWSAP1Q6NVH7 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SWSAP1Q6NVH7 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC22.55■■□□□ 1.2
SWSAP1Q6NVH7 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC22.55■■□□□ 1.2
SWSAP1Q6NVH7 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SWSAP1Q6NVH7 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SWSAP1Q6NVH7 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC22.54■■□□□ 1.2
SWSAP1Q6NVH7 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
SWSAP1Q6NVH7 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SWSAP1Q6NVH7 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SWSAP1Q6NVH7 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
SWSAP1Q6NVH7 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
SWSAP1Q6NVH7 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SWSAP1Q6NVH7 ABHD17AP6-201ENST00000458502 1044 ntBASIC22.54■■□□□ 1.2
SWSAP1Q6NVH7 AC023632.3-201ENST00000521633 145 ntBASIC22.54■■□□□ 1.2
SWSAP1Q6NVH7 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
SWSAP1Q6NVH7 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SWSAP1Q6NVH7 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC22.54■■□□□ 1.2
SWSAP1Q6NVH7 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC22.54■■□□□ 1.2
SWSAP1Q6NVH7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC22.54■■□□□ 1.2
SWSAP1Q6NVH7 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
SWSAP1Q6NVH7 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC22.54■■□□□ 1.2
SWSAP1Q6NVH7 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SWSAP1Q6NVH7 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC22.54■■□□□ 1.2
SWSAP1Q6NVH7 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SWSAP1Q6NVH7 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
SWSAP1Q6NVH7 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SWSAP1Q6NVH7 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SWSAP1Q6NVH7 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
SWSAP1Q6NVH7 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC22.53■■□□□ 1.2
SWSAP1Q6NVH7 C1QBPP2-201ENST00000528754 825 ntBASIC22.53■■□□□ 1.2
SWSAP1Q6NVH7 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC22.53■■□□□ 1.2
SWSAP1Q6NVH7 BID-203ENST00000399765 1879 ntTSL 2 BASIC22.53■■□□□ 1.2
SWSAP1Q6NVH7 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SWSAP1Q6NVH7 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
SWSAP1Q6NVH7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC22.52■■□□□ 1.2
SWSAP1Q6NVH7 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
SWSAP1Q6NVH7 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SWSAP1Q6NVH7 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
SWSAP1Q6NVH7 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC22.52■■□□□ 1.2
SWSAP1Q6NVH7 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SWSAP1Q6NVH7 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC22.52■■□□□ 1.2
SWSAP1Q6NVH7 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC22.52■■□□□ 1.2
SWSAP1Q6NVH7 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SWSAP1Q6NVH7 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
SWSAP1Q6NVH7 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
SWSAP1Q6NVH7 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC22.52■■□□□ 1.2
SWSAP1Q6NVH7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
SWSAP1Q6NVH7 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
SWSAP1Q6NVH7 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC22.52■■□□□ 1.2
SWSAP1Q6NVH7 HES2-206ENST00000489730 730 ntTSL 2 BASIC22.52■■□□□ 1.2
SWSAP1Q6NVH7 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC22.52■■□□□ 1.2
SWSAP1Q6NVH7 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SWSAP1Q6NVH7 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
SWSAP1Q6NVH7 AL359736.2-201ENST00000621992 437 ntBASIC22.52■■□□□ 1.2
SWSAP1Q6NVH7 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SWSAP1Q6NVH7 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC22.52■■□□□ 1.2
SWSAP1Q6NVH7 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
SWSAP1Q6NVH7 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SWSAP1Q6NVH7 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SWSAP1Q6NVH7 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms