Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
REEP3Q6NUK4 ZNRF2P3-201ENST00000424200 374 ntBASIC18.83■□□□□ 0.6
REEP3Q6NUK4 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
REEP3Q6NUK4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
REEP3Q6NUK4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
REEP3Q6NUK4 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
REEP3Q6NUK4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
REEP3Q6NUK4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.83■□□□□ 0.6
REEP3Q6NUK4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.83■□□□□ 0.6
REEP3Q6NUK4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.83■□□□□ 0.6
REEP3Q6NUK4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
REEP3Q6NUK4 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
REEP3Q6NUK4 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
REEP3Q6NUK4 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
REEP3Q6NUK4 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.82■□□□□ 0.6
REEP3Q6NUK4 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.82■□□□□ 0.6
REEP3Q6NUK4 PGM5P4-201ENST00000421970 445 ntBASIC18.82■□□□□ 0.6
REEP3Q6NUK4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
REEP3Q6NUK4 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
REEP3Q6NUK4 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.82■□□□□ 0.6
REEP3Q6NUK4 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
REEP3Q6NUK4 MYCNOS-205ENST00000641950 531 ntBASIC18.82■□□□□ 0.6
REEP3Q6NUK4 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
REEP3Q6NUK4 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
REEP3Q6NUK4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
REEP3Q6NUK4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
REEP3Q6NUK4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
REEP3Q6NUK4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
REEP3Q6NUK4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
REEP3Q6NUK4 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
REEP3Q6NUK4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
REEP3Q6NUK4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
REEP3Q6NUK4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
REEP3Q6NUK4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
REEP3Q6NUK4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
REEP3Q6NUK4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.82■□□□□ 0.6
REEP3Q6NUK4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
REEP3Q6NUK4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
REEP3Q6NUK4 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
REEP3Q6NUK4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.81■□□□□ 0.6
REEP3Q6NUK4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.81■□□□□ 0.6
REEP3Q6NUK4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
REEP3Q6NUK4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
REEP3Q6NUK4 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.81■□□□□ 0.6
REEP3Q6NUK4 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
REEP3Q6NUK4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
REEP3Q6NUK4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.81■□□□□ 0.6
REEP3Q6NUK4 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
REEP3Q6NUK4 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
REEP3Q6NUK4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.81■□□□□ 0.6
REEP3Q6NUK4 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
REEP3Q6NUK4 KRT18P61-201ENST00000585825 1298 ntBASIC18.81■□□□□ 0.6
REEP3Q6NUK4 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.81■□□□□ 0.6
REEP3Q6NUK4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.81■□□□□ 0.6
REEP3Q6NUK4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.81■□□□□ 0.6
REEP3Q6NUK4 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
REEP3Q6NUK4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.81■□□□□ 0.6
REEP3Q6NUK4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
REEP3Q6NUK4 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
REEP3Q6NUK4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
REEP3Q6NUK4 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
REEP3Q6NUK4 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
REEP3Q6NUK4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
REEP3Q6NUK4 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
REEP3Q6NUK4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.81■□□□□ 0.6
REEP3Q6NUK4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.8■□□□□ 0.6
REEP3Q6NUK4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.8■□□□□ 0.6
REEP3Q6NUK4 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.8■□□□□ 0.6
REEP3Q6NUK4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.8■□□□□ 0.6
REEP3Q6NUK4 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
REEP3Q6NUK4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
REEP3Q6NUK4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
REEP3Q6NUK4 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
REEP3Q6NUK4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
REEP3Q6NUK4 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
REEP3Q6NUK4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.8■□□□□ 0.6
REEP3Q6NUK4 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.8■□□□□ 0.6
REEP3Q6NUK4 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.8■□□□□ 0.6
REEP3Q6NUK4 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
REEP3Q6NUK4 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
REEP3Q6NUK4 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.8■□□□□ 0.6
REEP3Q6NUK4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.8■□□□□ 0.6
REEP3Q6NUK4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.8■□□□□ 0.6
REEP3Q6NUK4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
REEP3Q6NUK4 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
REEP3Q6NUK4 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
REEP3Q6NUK4 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
REEP3Q6NUK4 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
REEP3Q6NUK4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
REEP3Q6NUK4 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
REEP3Q6NUK4 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
REEP3Q6NUK4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
REEP3Q6NUK4 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.79■□□□□ 0.6
REEP3Q6NUK4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.79■□□□□ 0.6
REEP3Q6NUK4 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
REEP3Q6NUK4 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.79■□□□□ 0.6
REEP3Q6NUK4 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
REEP3Q6NUK4 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
REEP3Q6NUK4 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
REEP3Q6NUK4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms