Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.34■□□□□ 0.85
LGSNQ5TDP6 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
LGSNQ5TDP6 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
LGSNQ5TDP6 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LGSNQ5TDP6 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.34■□□□□ 0.85
LGSNQ5TDP6 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
LGSNQ5TDP6 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
LGSNQ5TDP6 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.34■□□□□ 0.85
LGSNQ5TDP6 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.34■□□□□ 0.85
LGSNQ5TDP6 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
LGSNQ5TDP6 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LGSNQ5TDP6 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.33■□□□□ 0.85
LGSNQ5TDP6 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LGSNQ5TDP6 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LGSNQ5TDP6 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.33■□□□□ 0.85
LGSNQ5TDP6 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.33■□□□□ 0.85
LGSNQ5TDP6 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.33■□□□□ 0.85
LGSNQ5TDP6 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.33■□□□□ 0.85
LGSNQ5TDP6 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LGSNQ5TDP6 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
LGSNQ5TDP6 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
LGSNQ5TDP6 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.33■□□□□ 0.84
LGSNQ5TDP6 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.33■□□□□ 0.84
LGSNQ5TDP6 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
LGSNQ5TDP6 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LGSNQ5TDP6 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LGSNQ5TDP6 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
LGSNQ5TDP6 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
LGSNQ5TDP6 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LGSNQ5TDP6 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.84
LGSNQ5TDP6 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LGSNQ5TDP6 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.32■□□□□ 0.84
LGSNQ5TDP6 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
LGSNQ5TDP6 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LGSNQ5TDP6 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.32■□□□□ 0.84
LGSNQ5TDP6 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.32■□□□□ 0.84
LGSNQ5TDP6 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LGSNQ5TDP6 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LGSNQ5TDP6 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LGSNQ5TDP6 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LGSNQ5TDP6 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.32■□□□□ 0.84
LGSNQ5TDP6 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
LGSNQ5TDP6 DUX4L2-201ENST00000561772 1275 ntBASIC20.32■□□□□ 0.84
LGSNQ5TDP6 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.32■□□□□ 0.84
LGSNQ5TDP6 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.32■□□□□ 0.84
LGSNQ5TDP6 DUX4L6-201ENST00000626483 1275 ntBASIC20.32■□□□□ 0.84
LGSNQ5TDP6 DUX4L1-201ENST00000627662 1275 ntBASIC20.32■□□□□ 0.84
LGSNQ5TDP6 DUX4L8-201ENST00000629013 1275 ntBASIC20.32■□□□□ 0.84
LGSNQ5TDP6 DUX4L3-201ENST00000630187 1275 ntBASIC20.32■□□□□ 0.84
LGSNQ5TDP6 DUX4L7-201ENST00000630678 1275 ntBASIC20.32■□□□□ 0.84
LGSNQ5TDP6 DUX4L5-201ENST00000630834 1275 ntBASIC20.32■□□□□ 0.84
LGSNQ5TDP6 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.32■□□□□ 0.84
LGSNQ5TDP6 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.32■□□□□ 0.84
LGSNQ5TDP6 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LGSNQ5TDP6 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.32■□□□□ 0.84
LGSNQ5TDP6 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.32■□□□□ 0.84
LGSNQ5TDP6 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LGSNQ5TDP6 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LGSNQ5TDP6 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.32■□□□□ 0.84
LGSNQ5TDP6 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LGSNQ5TDP6 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LGSNQ5TDP6 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.31■□□□□ 0.84
LGSNQ5TDP6 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LGSNQ5TDP6 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.31■□□□□ 0.84
LGSNQ5TDP6 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LGSNQ5TDP6 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LGSNQ5TDP6 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LGSNQ5TDP6 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LGSNQ5TDP6 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LGSNQ5TDP6 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LGSNQ5TDP6 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LGSNQ5TDP6 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
LGSNQ5TDP6 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LGSNQ5TDP6 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.31■□□□□ 0.84
LGSNQ5TDP6 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
LGSNQ5TDP6 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.31■□□□□ 0.84
LGSNQ5TDP6 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
LGSNQ5TDP6 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LGSNQ5TDP6 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LGSNQ5TDP6 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
LGSNQ5TDP6 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LGSNQ5TDP6 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.31■□□□□ 0.84
LGSNQ5TDP6 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
LGSNQ5TDP6 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LGSNQ5TDP6 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LGSNQ5TDP6 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
LGSNQ5TDP6 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
LGSNQ5TDP6 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LGSNQ5TDP6 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LGSNQ5TDP6 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LGSNQ5TDP6 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LGSNQ5TDP6 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
LGSNQ5TDP6 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.3■□□□□ 0.84
LGSNQ5TDP6 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LGSNQ5TDP6 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LGSNQ5TDP6 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.3■□□□□ 0.84
LGSNQ5TDP6 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.3■□□□□ 0.84
LGSNQ5TDP6 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
LGSNQ5TDP6 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.3■□□□□ 0.84
LGSNQ5TDP6 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms