Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00242Q5T6M2 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00242Q5T6M2 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
LINC00242Q5T6M2 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00242Q5T6M2 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00242Q5T6M2 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00242Q5T6M2 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00242Q5T6M2 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00242Q5T6M2 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC00242Q5T6M2 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00242Q5T6M2 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC13.8□□□□□ -0.2
LINC00242Q5T6M2 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00242Q5T6M2 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00242Q5T6M2 AC005332.7-201ENST00000614046 2005 ntBASIC13.8□□□□□ -0.2
LINC00242Q5T6M2 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00242Q5T6M2 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00242Q5T6M2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00242Q5T6M2 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LINC00242Q5T6M2 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC00242Q5T6M2 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC13.8□□□□□ -0.2
LINC00242Q5T6M2 AC012414.1-201ENST00000556676 535 ntBASIC13.8□□□□□ -0.2
LINC00242Q5T6M2 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00242Q5T6M2 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
LINC00242Q5T6M2 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00242Q5T6M2 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00242Q5T6M2 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC13.8□□□□□ -0.2
LINC00242Q5T6M2 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC13.8□□□□□ -0.2
LINC00242Q5T6M2 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC00242Q5T6M2 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC13.8□□□□□ -0.2
LINC00242Q5T6M2 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00242Q5T6M2 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC13.8□□□□□ -0.2
LINC00242Q5T6M2 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC00242Q5T6M2 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00242Q5T6M2 POLI-202ENST00000406285 2030 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC00242Q5T6M2 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00242Q5T6M2 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00242Q5T6M2 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00242Q5T6M2 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00242Q5T6M2 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00242Q5T6M2 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00242Q5T6M2 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00242Q5T6M2 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC13.79□□□□□ -0.2
LINC00242Q5T6M2 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00242Q5T6M2 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC13.79□□□□□ -0.2
LINC00242Q5T6M2 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00242Q5T6M2 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC13.79□□□□□ -0.2
LINC00242Q5T6M2 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
LINC00242Q5T6M2 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC13.79□□□□□ -0.2
LINC00242Q5T6M2 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC13.79□□□□□ -0.2
LINC00242Q5T6M2 AC120498.10-201ENST00000621827 505 ntBASIC13.79□□□□□ -0.2
LINC00242Q5T6M2 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00242Q5T6M2 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC13.79□□□□□ -0.2
LINC00242Q5T6M2 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
LINC00242Q5T6M2 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00242Q5T6M2 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC13.79□□□□□ -0.2
LINC00242Q5T6M2 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
LINC00242Q5T6M2 TNXA-203ENST00000507684 2038 ntBASIC13.79□□□□□ -0.2
LINC00242Q5T6M2 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00242Q5T6M2 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00242Q5T6M2 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
LINC00242Q5T6M2 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00242Q5T6M2 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC13.79□□□□□ -0.2
LINC00242Q5T6M2 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00242Q5T6M2 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00242Q5T6M2 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC13.79□□□□□ -0.2
LINC00242Q5T6M2 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00242Q5T6M2 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC13.79□□□□□ -0.2
LINC00242Q5T6M2 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00242Q5T6M2 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
LINC00242Q5T6M2 DPP3P2-201ENST00000416030 1696 ntBASIC13.79□□□□□ -0.2
LINC00242Q5T6M2 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00242Q5T6M2 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00242Q5T6M2 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00242Q5T6M2 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00242Q5T6M2 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC13.78□□□□□ -0.2
LINC00242Q5T6M2 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
LINC00242Q5T6M2 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
LINC00242Q5T6M2 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00242Q5T6M2 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00242Q5T6M2 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00242Q5T6M2 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC13.78□□□□□ -0.2
LINC00242Q5T6M2 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC13.78□□□□□ -0.2
LINC00242Q5T6M2 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00242Q5T6M2 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
LINC00242Q5T6M2 PTPA-214ENST00000423100 988 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC00242Q5T6M2 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC13.78□□□□□ -0.2
LINC00242Q5T6M2 TPRG1LP1-201ENST00000598702 760 ntBASIC13.78□□□□□ -0.2
LINC00242Q5T6M2 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00242Q5T6M2 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00242Q5T6M2 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00242Q5T6M2 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00242Q5T6M2 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
LINC00242Q5T6M2 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
LINC00242Q5T6M2 KRT87P-202ENST00000534226 1464 ntBASIC13.78□□□□□ -0.2
LINC00242Q5T6M2 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00242Q5T6M2 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LINC00242Q5T6M2 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00242Q5T6M2 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00242Q5T6M2 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LINC00242Q5T6M2 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms