Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRTCAP3Q53RY4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRTCAP3Q53RY4 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRTCAP3Q53RY4 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRTCAP3Q53RY4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KRTCAP3Q53RY4 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KRTCAP3Q53RY4 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.15■□□□□ 0.5
KRTCAP3Q53RY4 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRTCAP3Q53RY4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRTCAP3Q53RY4 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRTCAP3Q53RY4 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KRTCAP3Q53RY4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.15■□□□□ 0.5
KRTCAP3Q53RY4 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRTCAP3Q53RY4 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRTCAP3Q53RY4 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRTCAP3Q53RY4 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KRTCAP3Q53RY4 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRTCAP3Q53RY4 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRTCAP3Q53RY4 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
KRTCAP3Q53RY4 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRTCAP3Q53RY4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRTCAP3Q53RY4 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KRTCAP3Q53RY4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
KRTCAP3Q53RY4 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.14■□□□□ 0.5
KRTCAP3Q53RY4 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRTCAP3Q53RY4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.14■□□□□ 0.49
KRTCAP3Q53RY4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KRTCAP3Q53RY4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KRTCAP3Q53RY4 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
KRTCAP3Q53RY4 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
KRTCAP3Q53RY4 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRTCAP3Q53RY4 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.14■□□□□ 0.49
KRTCAP3Q53RY4 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.14■□□□□ 0.49
KRTCAP3Q53RY4 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.14■□□□□ 0.49
KRTCAP3Q53RY4 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.14■□□□□ 0.49
KRTCAP3Q53RY4 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KRTCAP3Q53RY4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.14■□□□□ 0.49
KRTCAP3Q53RY4 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.14■□□□□ 0.49
KRTCAP3Q53RY4 AC113410.3-201ENST00000623366 203 ntBASIC18.14■□□□□ 0.49
KRTCAP3Q53RY4 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRTCAP3Q53RY4 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.14■□□□□ 0.49
KRTCAP3Q53RY4 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRTCAP3Q53RY4 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KRTCAP3Q53RY4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRTCAP3Q53RY4 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRTCAP3Q53RY4 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.13■□□□□ 0.49
KRTCAP3Q53RY4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.13■□□□□ 0.49
KRTCAP3Q53RY4 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRTCAP3Q53RY4 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRTCAP3Q53RY4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
KRTCAP3Q53RY4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRTCAP3Q53RY4 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.13■□□□□ 0.49
KRTCAP3Q53RY4 AL353807.1-201ENST00000427475 662 ntBASIC18.13■□□□□ 0.49
KRTCAP3Q53RY4 KRT16P5-201ENST00000455284 522 ntBASIC18.13■□□□□ 0.49
KRTCAP3Q53RY4 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.13■□□□□ 0.49
KRTCAP3Q53RY4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.13■□□□□ 0.49
KRTCAP3Q53RY4 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.13■□□□□ 0.49
KRTCAP3Q53RY4 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
KRTCAP3Q53RY4 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.13■□□□□ 0.49
KRTCAP3Q53RY4 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.13■□□□□ 0.49
KRTCAP3Q53RY4 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
KRTCAP3Q53RY4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRTCAP3Q53RY4 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
KRTCAP3Q53RY4 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRTCAP3Q53RY4 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
KRTCAP3Q53RY4 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRTCAP3Q53RY4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
KRTCAP3Q53RY4 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRTCAP3Q53RY4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.12■□□□□ 0.49
KRTCAP3Q53RY4 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRTCAP3Q53RY4 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.12■□□□□ 0.49
KRTCAP3Q53RY4 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRTCAP3Q53RY4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.12■□□□□ 0.49
KRTCAP3Q53RY4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
KRTCAP3Q53RY4 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.12■□□□□ 0.49
KRTCAP3Q53RY4 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRTCAP3Q53RY4 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
KRTCAP3Q53RY4 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
KRTCAP3Q53RY4 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRTCAP3Q53RY4 FAM210CP-201ENST00000445714 574 ntBASIC18.12■□□□□ 0.49
KRTCAP3Q53RY4 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRTCAP3Q53RY4 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
KRTCAP3Q53RY4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRTCAP3Q53RY4 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
KRTCAP3Q53RY4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.12■□□□□ 0.49
KRTCAP3Q53RY4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.12■□□□□ 0.49
KRTCAP3Q53RY4 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRTCAP3Q53RY4 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
KRTCAP3Q53RY4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRTCAP3Q53RY4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
KRTCAP3Q53RY4 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.12■□□□□ 0.49
KRTCAP3Q53RY4 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRTCAP3Q53RY4 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRTCAP3Q53RY4 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRTCAP3Q53RY4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.12■□□□□ 0.49
KRTCAP3Q53RY4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.11■□□□□ 0.49
KRTCAP3Q53RY4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRTCAP3Q53RY4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRTCAP3Q53RY4 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRTCAP3Q53RY4 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms