Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC104187.1-201ENST00000607510 612 ntBASIC15.42■□□□□ 0.06
HIST1H1AQ02539 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC15.42■□□□□ 0.06
HIST1H1AQ02539 DUX4L6-201ENST00000626483 1275 ntBASIC15.42■□□□□ 0.06
HIST1H1AQ02539 DUX4L1-201ENST00000627662 1275 ntBASIC15.42■□□□□ 0.06
HIST1H1AQ02539 DUX4L8-201ENST00000629013 1275 ntBASIC15.42■□□□□ 0.06
HIST1H1AQ02539 DUX4L3-201ENST00000630187 1275 ntBASIC15.42■□□□□ 0.06
HIST1H1AQ02539 DUX4L7-201ENST00000630678 1275 ntBASIC15.42■□□□□ 0.06
HIST1H1AQ02539 DUX4L5-201ENST00000630834 1275 ntBASIC15.42■□□□□ 0.06
HIST1H1AQ02539 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HIST1H1AQ02539 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HIST1H1AQ02539 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HIST1H1AQ02539 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HIST1H1AQ02539 KRT16P2-201ENST00000414673 1423 ntBASIC15.42■□□□□ 0.06
HIST1H1AQ02539 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HIST1H1AQ02539 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC15.42■□□□□ 0.06
HIST1H1AQ02539 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HIST1H1AQ02539 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H1AQ02539 AC027702.1-201ENST00000563810 1770 ntBASIC15.41■□□□□ 0.06
HIST1H1AQ02539 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H1AQ02539 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H1AQ02539 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
HIST1H1AQ02539 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H1AQ02539 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H1AQ02539 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H1AQ02539 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H1AQ02539 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H1AQ02539 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC15.41■□□□□ 0.06
HIST1H1AQ02539 JTB-203ENST00000368589 1216 ntTSL 2 BASIC15.41■□□□□ 0.06
HIST1H1AQ02539 YBX1P1-201ENST00000445822 960 ntBASIC15.41■□□□□ 0.06
HIST1H1AQ02539 TERF1P2-201ENST00000583350 1212 ntBASIC15.41■□□□□ 0.06
HIST1H1AQ02539 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC15.41■□□□□ 0.06
HIST1H1AQ02539 SP2-202ENST00000613139 908 ntTSL 5 BASIC15.41■□□□□ 0.06
HIST1H1AQ02539 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
HIST1H1AQ02539 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H1AQ02539 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H1AQ02539 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC15.41■□□□□ 0.06
HIST1H1AQ02539 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
HIST1H1AQ02539 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
HIST1H1AQ02539 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H1AQ02539 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H1AQ02539 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H1AQ02539 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H1AQ02539 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H1AQ02539 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H1AQ02539 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
HIST1H1AQ02539 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC15.4■□□□□ 0.06
HIST1H1AQ02539 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
HIST1H1AQ02539 NAA20-201ENST00000310450 920 ntTSL 2 BASIC15.4■□□□□ 0.06
HIST1H1AQ02539 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H1AQ02539 AC123595.1-201ENST00000440769 1046 ntBASIC15.4■□□□□ 0.06
HIST1H1AQ02539 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC15.4■□□□□ 0.06
HIST1H1AQ02539 TESC-206ENST00000541210 936 ntTSL 3 BASIC15.4■□□□□ 0.06
HIST1H1AQ02539 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC15.4■□□□□ 0.06
HIST1H1AQ02539 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC15.4■□□□□ 0.06
HIST1H1AQ02539 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC15.4■□□□□ 0.06
HIST1H1AQ02539 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
HIST1H1AQ02539 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H1AQ02539 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC15.4■□□□□ 0.06
HIST1H1AQ02539 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC15.4■□□□□ 0.06
HIST1H1AQ02539 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H1AQ02539 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H1AQ02539 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H1AQ02539 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H1AQ02539 STAC-204ENST00000457375 1366 ntTSL 2 BASIC15.39■□□□□ 0.05
HIST1H1AQ02539 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H1AQ02539 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H1AQ02539 COX20-201ENST00000366528 568 ntTSL 2 BASIC15.39■□□□□ 0.05
HIST1H1AQ02539 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H1AQ02539 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC15.39■□□□□ 0.05
HIST1H1AQ02539 AP001160.3-201ENST00000601484 763 ntBASIC15.39■□□□□ 0.05
HIST1H1AQ02539 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H1AQ02539 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
HIST1H1AQ02539 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H1AQ02539 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H1AQ02539 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H1AQ02539 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC15.39■□□□□ 0.05
HIST1H1AQ02539 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H1AQ02539 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H1AQ02539 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H1AQ02539 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H1AQ02539 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H1AQ02539 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H1AQ02539 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H1AQ02539 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H1AQ02539 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
HIST1H1AQ02539 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC15.38■□□□□ 0.05
HIST1H1AQ02539 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H1AQ02539 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
HIST1H1AQ02539 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H1AQ02539 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC15.38■□□□□ 0.05
HIST1H1AQ02539 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H1AQ02539 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC15.38■□□□□ 0.05
HIST1H1AQ02539 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H1AQ02539 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC15.38■□□□□ 0.05
HIST1H1AQ02539 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC15.38■□□□□ 0.05
HIST1H1AQ02539 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC15.38■□□□□ 0.05
HIST1H1AQ02539 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H1AQ02539 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC15.38■□□□□ 0.05
HIST1H1AQ02539 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H1AQ02539 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms