Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GABREP78334 HTR7P1-201ENST00000538670 1336 ntBASIC19.28■□□□□ 0.68
GABREP78334 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GABREP78334 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GABREP78334 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.28■□□□□ 0.68
GABREP78334 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.28■□□□□ 0.68
GABREP78334 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
GABREP78334 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GABREP78334 ARMC10P1-201ENST00000313754 855 ntBASIC19.28■□□□□ 0.68
GABREP78334 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.28■□□□□ 0.68
GABREP78334 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.28■□□□□ 0.68
GABREP78334 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GABREP78334 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.28■□□□□ 0.68
GABREP78334 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.28■□□□□ 0.68
GABREP78334 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
GABREP78334 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GABREP78334 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GABREP78334 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GABREP78334 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
GABREP78334 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.28■□□□□ 0.68
GABREP78334 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.27■□□□□ 0.68
GABREP78334 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
GABREP78334 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GABREP78334 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
GABREP78334 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
GABREP78334 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GABREP78334 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GABREP78334 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GABREP78334 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GABREP78334 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
GABREP78334 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
GABREP78334 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GABREP78334 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.27■□□□□ 0.68
GABREP78334 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.27■□□□□ 0.68
GABREP78334 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.27■□□□□ 0.68
GABREP78334 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.27■□□□□ 0.68
GABREP78334 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.27■□□□□ 0.68
GABREP78334 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.27■□□□□ 0.68
GABREP78334 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.27■□□□□ 0.68
GABREP78334 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.27■□□□□ 0.68
GABREP78334 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.27■□□□□ 0.68
GABREP78334 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GABREP78334 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GABREP78334 PKD1P6-201ENST00000343738 4769 ntBASIC19.27■□□□□ 0.68
GABREP78334 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
GABREP78334 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.27■□□□□ 0.67
GABREP78334 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
GABREP78334 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.27■□□□□ 0.67
GABREP78334 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
GABREP78334 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GABREP78334 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GABREP78334 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
GABREP78334 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GABREP78334 AL353807.1-201ENST00000427475 662 ntBASIC19.26■□□□□ 0.67
GABREP78334 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GABREP78334 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GABREP78334 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.26■□□□□ 0.67
GABREP78334 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.26■□□□□ 0.67
GABREP78334 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
GABREP78334 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.26■□□□□ 0.67
GABREP78334 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.26■□□□□ 0.67
GABREP78334 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.26■□□□□ 0.67
GABREP78334 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
GABREP78334 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.26■□□□□ 0.67
GABREP78334 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GABREP78334 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
GABREP78334 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
GABREP78334 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
GABREP78334 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.25■□□□□ 0.67
GABREP78334 FAM197Y1-201ENST00000421178 764 ntBASIC19.25■□□□□ 0.67
GABREP78334 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GABREP78334 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GABREP78334 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GABREP78334 KRT16P5-201ENST00000455284 522 ntBASIC19.25■□□□□ 0.67
GABREP78334 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.25■□□□□ 0.67
GABREP78334 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.25■□□□□ 0.67
GABREP78334 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.25■□□□□ 0.67
GABREP78334 AL049597.2-201ENST00000565575 961 ntBASIC19.25■□□□□ 0.67
GABREP78334 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.25■□□□□ 0.67
GABREP78334 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.25■□□□□ 0.67
GABREP78334 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GABREP78334 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GABREP78334 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GABREP78334 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GABREP78334 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.25■□□□□ 0.67
GABREP78334 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
GABREP78334 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GABREP78334 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GABREP78334 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
GABREP78334 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GABREP78334 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GABREP78334 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.24■□□□□ 0.67
GABREP78334 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
GABREP78334 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GABREP78334 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GABREP78334 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.24■□□□□ 0.67
GABREP78334 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
GABREP78334 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
GABREP78334 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GABREP78334 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms