Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.35■□□□□ 0.37
UBA52P62987 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
UBA52P62987 TMEM191A-211ENST00000637163 1067 ntBASIC17.35■□□□□ 0.37
UBA52P62987 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.35■□□□□ 0.37
UBA52P62987 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UBA52P62987 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UBA52P62987 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBA52P62987 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.35■□□□□ 0.37
UBA52P62987 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
UBA52P62987 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBA52P62987 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UBA52P62987 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBA52P62987 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBA52P62987 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
UBA52P62987 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBA52P62987 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
UBA52P62987 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBA52P62987 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBA52P62987 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBA52P62987 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UBA52P62987 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBA52P62987 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBA52P62987 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.34■□□□□ 0.37
UBA52P62987 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBA52P62987 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBA52P62987 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBA52P62987 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBA52P62987 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBA52P62987 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBA52P62987 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBA52P62987 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UBA52P62987 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
UBA52P62987 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.34■□□□□ 0.37
UBA52P62987 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UBA52P62987 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.34■□□□□ 0.37
UBA52P62987 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
UBA52P62987 USP45-205ENST00000472914 1617 ntTSL 5 BASIC17.34■□□□□ 0.37
UBA52P62987 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.34■□□□□ 0.37
UBA52P62987 CD99P1-205ENST00000527459 561 ntBASIC17.34■□□□□ 0.37
UBA52P62987 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
UBA52P62987 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.34■□□□□ 0.37
UBA52P62987 AC026471.1-201ENST00000564629 3026 ntBASIC17.34■□□□□ 0.37
UBA52P62987 LETM1P2-201ENST00000597330 2178 ntBASIC17.34■□□□□ 0.37
UBA52P62987 AL121832.2-201ENST00000610979 668 ntBASIC17.34■□□□□ 0.37
UBA52P62987 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UBA52P62987 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBA52P62987 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBA52P62987 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.34■□□□□ 0.37
UBA52P62987 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.33■□□□□ 0.37
UBA52P62987 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBA52P62987 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.33■□□□□ 0.37
UBA52P62987 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBA52P62987 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBA52P62987 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
UBA52P62987 KRT87P-202ENST00000534226 1464 ntBASIC17.33■□□□□ 0.37
UBA52P62987 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBA52P62987 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.33■□□□□ 0.36
UBA52P62987 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBA52P62987 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.33■□□□□ 0.36
UBA52P62987 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
UBA52P62987 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
UBA52P62987 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
UBA52P62987 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.33■□□□□ 0.36
UBA52P62987 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.33■□□□□ 0.36
UBA52P62987 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.33■□□□□ 0.36
UBA52P62987 AC104187.1-201ENST00000607510 612 ntBASIC17.33■□□□□ 0.36
UBA52P62987 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBA52P62987 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBA52P62987 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
UBA52P62987 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBA52P62987 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.33■□□□□ 0.36
UBA52P62987 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
UBA52P62987 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
UBA52P62987 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
UBA52P62987 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBA52P62987 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UBA52P62987 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
UBA52P62987 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.32■□□□□ 0.36
UBA52P62987 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBA52P62987 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.32■□□□□ 0.36
UBA52P62987 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.32■□□□□ 0.36
UBA52P62987 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBA52P62987 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UBA52P62987 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UBA52P62987 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBA52P62987 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.32■□□□□ 0.36
UBA52P62987 AC142086.2-201ENST00000569753 217 ntBASIC17.32■□□□□ 0.36
UBA52P62987 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.32■□□□□ 0.36
UBA52P62987 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.32■□□□□ 0.36
UBA52P62987 AC231657.2-201ENST00000624556 255 ntBASIC17.32■□□□□ 0.36
UBA52P62987 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBA52P62987 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBA52P62987 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBA52P62987 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
UBA52P62987 AC005224.4-201ENST00000583262 1652 ntBASIC17.32■□□□□ 0.36
UBA52P62987 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
UBA52P62987 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.32■□□□□ 0.36
UBA52P62987 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.32■□□□□ 0.36
UBA52P62987 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.32■□□□□ 0.36
UBA52P62987 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms