Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CMC4P56277 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC15.08■□□□□ 0
CMC4P56277 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC15.08■□□□□ 0
CMC4P56277 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CMC4P56277 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CMC4P56277 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CMC4P56277 FP700111.2-201ENST00000619190 1892 ntBASIC15.08■□□□□ 0
CMC4P56277 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CMC4P56277 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC15.08■□□□□ 0
CMC4P56277 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CMC4P56277 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CMC4P56277 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
CMC4P56277 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CMC4P56277 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC15.07■□□□□ 0
CMC4P56277 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.07■□□□□ 0
CMC4P56277 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CMC4P56277 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CMC4P56277 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CMC4P56277 AF106564.1-201ENST00000607058 2553 ntBASIC15.07■□□□□ 0
CMC4P56277 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CMC4P56277 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CMC4P56277 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC15.07■□□□□ 0
CMC4P56277 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CMC4P56277 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CMC4P56277 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC15.07■□□□□ 0
CMC4P56277 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC15.07■□□□□ 0
CMC4P56277 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC15.07■□□□□ 0
CMC4P56277 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC15.07■□□□□ 0
CMC4P56277 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC15.07■□□□□ 0
CMC4P56277 GAMT-205ENST00000640762 751 ntTSL 5 BASIC15.07■□□□□ 0
CMC4P56277 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC15.07■□□□□ 0
CMC4P56277 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CMC4P56277 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CMC4P56277 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CMC4P56277 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC15.07■□□□□ 0
CMC4P56277 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC15.07■□□□□ 0
CMC4P56277 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC15.07■□□□□ 0
CMC4P56277 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
CMC4P56277 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
CMC4P56277 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CMC4P56277 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CMC4P56277 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CMC4P56277 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC15.06■□□□□ 0
CMC4P56277 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CMC4P56277 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CMC4P56277 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CMC4P56277 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CMC4P56277 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC15.06■□□□□ 0
CMC4P56277 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC15.06■□□□□ 0
CMC4P56277 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC15.06■□□□□ 0
CMC4P56277 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CMC4P56277 AC023632.3-201ENST00000521633 145 ntBASIC15.06■□□□□ 0
CMC4P56277 BET1L-207ENST00000529614 560 ntTSL 5 BASIC15.06■□□□□ 0
CMC4P56277 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC15.06■□□□□ 0
CMC4P56277 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC15.06■□□□□ 0
CMC4P56277 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CMC4P56277 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC15.06■□□□□ 0
CMC4P56277 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CMC4P56277 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CMC4P56277 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC15.06■□□□□ 0
CMC4P56277 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC15.06■□□□□ 0
CMC4P56277 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CMC4P56277 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
CMC4P56277 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC15.06■□□□□ 0
CMC4P56277 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC15.06■□□□□ 0
CMC4P56277 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC15.05■□□□□ 0
CMC4P56277 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CMC4P56277 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CMC4P56277 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC15.05■□□□□ -0
CMC4P56277 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC15.05■□□□□ -0
CMC4P56277 OR2A1-AS1-201ENST00000462305 773 ntBASIC15.05■□□□□ -0
CMC4P56277 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC15.05■□□□□ -0
CMC4P56277 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC15.05■□□□□ -0
CMC4P56277 HLA-B-256ENST00000639848 1089 ntBASIC15.05■□□□□ -0
CMC4P56277 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC15.05■□□□□ -0
CMC4P56277 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC15.05■□□□□ -0
CMC4P56277 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CMC4P56277 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC15.05■□□□□ -0
CMC4P56277 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
CMC4P56277 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CMC4P56277 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CMC4P56277 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC15.05■□□□□ -0
CMC4P56277 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC15.05■□□□□ -0
CMC4P56277 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
CMC4P56277 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CMC4P56277 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CMC4P56277 AC005229.4-201ENST00000610085 2198 ntBASIC15.04■□□□□ -0
CMC4P56277 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC15.04■□□□□ -0
CMC4P56277 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC15.04■□□□□ -0
CMC4P56277 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CMC4P56277 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CMC4P56277 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CMC4P56277 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CMC4P56277 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CMC4P56277 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CMC4P56277 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC15.04■□□□□ -0
CMC4P56277 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC15.04■□□□□ -0
CMC4P56277 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CMC4P56277 MFF-205ENST00000354503 1085 ntTSL 2 BASIC15.04■□□□□ -0
CMC4P56277 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms