Protein–RNA interactions for Protein: P53836

CAF120, CCR4-NOT transcriptional complex subunit CAF120, yeastyeast

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF120P53836 RSC1YGR056W 2787 nt3.36□□□□□ -1.87
CAF120P53836 VMA9YCL005W-A 222 nt3.36□□□□□ -1.87
CAF120P53836 EXO84YBR102C 2262 nt3.36□□□□□ -1.87
CAF120P53836 VPH1YOR270C 2523 nt3.35□□□□□ -1.87
CAF120P53836 ENA5YDR038C 3276 nt3.35□□□□□ -1.87
CAF120P53836 ENA2YDR039C 3276 nt3.35□□□□□ -1.87
CAF120P53836 ENA1YDR040C 3276 nt3.35□□□□□ -1.87
CAF120P53836 BCH1YMR237W 2175 nt3.35□□□□□ -1.87
CAF120P53836 ATG13YPR185W 2217 nt3.35□□□□□ -1.87
CAF120P53836 SLY1YDR189W 2001 nt3.34□□□□□ -1.87
CAF120P53836 FYV10YIL097W 1551 nt3.34□□□□□ -1.87
CAF120P53836 YFL065CYFL065C 309 nt3.34□□□□□ -1.87
CAF120P53836 YLR154C-HYLR154C-H 132 nt3.34□□□□□ -1.87
CAF120P53836 YLR156C-AYLR156C-A 132 nt3.34□□□□□ -1.87
CAF120P53836 YLR157C-CYLR157C-C 132 nt3.34□□□□□ -1.87
CAF120P53836 YLR159C-AYLR159C-A 132 nt3.34□□□□□ -1.87
CAF120P53836 LYS14YDR034C 2373 nt3.34□□□□□ -1.87
CAF120P53836 NIP100YPL174C 2607 nt3.34□□□□□ -1.88
CAF120P53836 ROG1YGL144C 2058 nt3.34□□□□□ -1.88
CAF120P53836 YJL070CYJL070C 2667 nt3.33□□□□□ -1.88
CAF120P53836 COG3YER157W 2406 nt3.33□□□□□ -1.88
CAF120P53836 NAB6YML117W 3405 nt3.33□□□□□ -1.88
CAF120P53836 TFC1YBR123C 1950 nt3.32□□□□□ -1.88
CAF120P53836 UTP8YGR128C 2142 nt3.32□□□□□ -1.88
CAF120P53836 YDR210W-BYDR210W-B 5313 nt3.32□□□□□ -1.88
CAF120P53836 YDR261W-BYDR261W-B 5313 nt3.32□□□□□ -1.88
CAF120P53836 YFL002W-AYFL002W-A 5313 nt3.32□□□□□ -1.88
CAF120P53836 YGR161W-BYGR161W-B 5313 nt3.32□□□□□ -1.88
CAF120P53836 YLR410W-BYLR410W-B 5313 nt3.32□□□□□ -1.88
CAF120P53836 YCL019WYCL019W 5313 nt3.32□□□□□ -1.88
CAF120P53836 SMC3YJL074C 3693 nt3.32□□□□□ -1.88
CAF120P53836 APC11YDL008W 498 nt3.32□□□□□ -1.88
CAF120P53836 YAL067W-AYAL067W-A 228 nt3.32□□□□□ -1.88
CAF120P53836 RPS12YOR369C 432 nt3.32□□□□□ -1.88
CAF120P53836 YPR203WYPR203W 309 nt3.32□□□□□ -1.88
CAF120P53836 GIS4YML006C 2325 nt3.32□□□□□ -1.88
CAF120P53836 SGD1YLR336C 2700 nt3.31□□□□□ -1.88
CAF120P53836 PBY1YBR094W 2262 nt3.31□□□□□ -1.88
CAF120P53836 RLI1YDR091C 1827 nt3.31□□□□□ -1.88
CAF120P53836 FAP7YDL166C 594 nt3.31□□□□□ -1.88
CAF120P53836 RTC6YPL183W-A 282 nt3.31□□□□□ -1.88
CAF120P53836 RPA135YPR010C 3612 nt3.3□□□□□ -1.88
CAF120P53836 YAL037C-AYAL037C-A 93 nt3.3□□□□□ -1.88
CAF120P53836 AIM44YPL158C 2277 nt3.3□□□□□ -1.88
CAF120P53836 PFF1YBR074W 2931 nt3.3□□□□□ -1.88
CAF120P53836 RSE1YML049C 4086 nt3.29□□□□□ -1.88
CAF120P53836 RSN1YMR266W 2862 nt3.29□□□□□ -1.88
CAF120P53836 DYN2YDR424C 279 nt3.29□□□□□ -1.88
CAF120P53836 snR53snR53 91 nt3.29□□□□□ -1.88
CAF120P53836 VPS34YLR240W 2628 nt3.29□□□□□ -1.88
CAF120P53836 KAP104YBR017C 2757 nt3.29□□□□□ -1.88
CAF120P53836 STE23YLR389C 3084 nt3.28□□□□□ -1.88
CAF120P53836 AUS1YOR011W 4185 nt3.28□□□□□ -1.88
CAF120P53836 SPC98YNL126W 2541 nt3.28□□□□□ -1.88
CAF120P53836 YJL120WYJL120W 324 nt3.28□□□□□ -1.88
CAF120P53836 PSO2YMR137C 1986 nt3.28□□□□□ -1.88
CAF120P53836 RRP5YMR229C 5190 nt3.28□□□□□ -1.88
CAF120P53836 MTR4YJL050W 3222 nt3.28□□□□□ -1.88
CAF120P53836 PXA2YKL188C 2562 nt3.27□□□□□ -1.89
CAF120P53836 SRP14YDL092W 441 nt3.27□□□□□ -1.89
CAF120P53836 YHR032W-AYHR032W-A 180 nt3.27□□□□□ -1.89
CAF120P53836 YIL134C-AYIL134C-A 204 nt3.27□□□□□ -1.89
CAF120P53836 snR43snR43 209 nt3.27□□□□□ -1.89
CAF120P53836 CHS6YJL099W 2241 nt3.27□□□□□ -1.89
CAF120P53836 PSK1YAL017W 4071 nt3.26□□□□□ -1.89
CAF120P53836 FMP16YDR070C 282 nt3.26□□□□□ -1.89
CAF120P53836 YLR146W-AYLR146W-A 189 nt3.26□□□□□ -1.89
CAF120P53836 RPS25BYLR333C 327 nt3.26□□□□□ -1.89
CAF120P53836 YLR149CYLR149C 2193 nt3.25□□□□□ -1.89
CAF120P53836 GIS1YDR096W 2685 nt3.25□□□□□ -1.89
CAF120P53836 YCR043CYCR043C 384 nt3.25□□□□□ -1.89
CAF120P53836 PAU3YCR104W 375 nt3.25□□□□□ -1.89
CAF120P53836 YMR31YFR049W 372 nt3.25□□□□□ -1.89
CAF120P53836 YHR131W-AYHR131W-A 246 nt3.25□□□□□ -1.89
CAF120P53836 RPL42BYHR141C 321 nt3.25□□□□□ -1.89
CAF120P53836 COX5BYIL111W 456 nt3.25□□□□□ -1.89
CAF120P53836 YBL012CYBL012C 402 nt3.25□□□□□ -1.89
CAF120P53836 MSC6YOR354C 2079 nt3.24□□□□□ -1.89
CAF120P53836 STU2YLR045C 2667 nt3.24□□□□□ -1.89
CAF120P53836 GRR1YJR090C 3456 nt3.24□□□□□ -1.89
CAF120P53836 BOI1YBL085W 2943 nt3.24□□□□□ -1.89
CAF120P53836 MET5YJR137C 4329 nt3.24□□□□□ -1.89
CAF120P53836 YPR089WYPR089W 2667 nt3.23□□□□□ -1.89
CAF120P53836 YFR016CYFR016C 3702 nt3.23□□□□□ -1.89
CAF120P53836 YDR034C-AYDR034C-A 177 nt3.23□□□□□ -1.89
CAF120P53836 YER078W-AYER078W-A 165 nt3.23□□□□□ -1.89
CAF120P53836 RPS28BYLR264W 204 nt3.23□□□□□ -1.89
CAF120P53836 PDR8YLR266C 2106 nt3.23□□□□□ -1.89
CAF120P53836 GCN1YGL195W 8019 nt3.22□□□□□ -1.89
CAF120P53836 SMY2YBR172C 2223 nt3.22□□□□□ -1.89
CAF120P53836 SAK1YER129W 3429 nt3.22□□□□□ -1.89
CAF120P53836 DSE4YNR067C 3354 nt3.21□□□□□ -1.89
CAF120P53836 BMS1YPL217C 3552 nt3.21□□□□□ -1.9
CAF120P53836 RPL20AYMR242C 519 nt3.21□□□□□ -1.9
CAF120P53836 YEL025CYEL025C 3567 nt3.21□□□□□ -1.9
CAF120P53836 POL3YDL102W 3294 nt3.2□□□□□ -1.9
CAF120P53836 POM152YMR129W 4014 nt3.2□□□□□ -1.9
CAF120P53836 RFX1YLR176C 2436 nt3.2□□□□□ -1.9
CAF120P53836 MAK21YDR060W 3078 nt3.2□□□□□ -1.9
CAF120P53836 EDS1YBR033W 2760 nt3.2□□□□□ -1.9
Retrieved 100 of 7,029 protein–RNA pairs in 11.6 ms