Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.17■■□□□ 1.3
LBX1P52954 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LBX1P52954 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
LBX1P52954 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
LBX1P52954 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC23.16■■□□□ 1.3
LBX1P52954 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
LBX1P52954 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LBX1P52954 HOMER2P1-201ENST00000455653 964 ntBASIC23.16■■□□□ 1.3
LBX1P52954 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
LBX1P52954 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC23.16■■□□□ 1.3
LBX1P52954 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC23.16■■□□□ 1.3
LBX1P52954 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC23.16■■□□□ 1.3
LBX1P52954 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC23.16■■□□□ 1.3
LBX1P52954 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LBX1P52954 AL356652.1-201ENST00000615962 565 ntBASIC23.16■■□□□ 1.3
LBX1P52954 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
LBX1P52954 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC23.16■■□□□ 1.3
LBX1P52954 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
LBX1P52954 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LBX1P52954 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.15■■□□□ 1.3
LBX1P52954 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
LBX1P52954 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
LBX1P52954 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC23.15■■□□□ 1.3
LBX1P52954 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LBX1P52954 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LBX1P52954 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC23.15■■□□□ 1.3
LBX1P52954 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LBX1P52954 DAP-202ENST00000432074 1048 ntTSL 2 BASIC23.15■■□□□ 1.3
LBX1P52954 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC23.15■■□□□ 1.3
LBX1P52954 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC23.15■■□□□ 1.3
LBX1P52954 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LBX1P52954 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LBX1P52954 PRR29-207ENST00000580752 458 ntTSL 3 BASIC23.15■■□□□ 1.3
LBX1P52954 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC23.15■■□□□ 1.3
LBX1P52954 DGCR10-201ENST00000609839 495 ntBASIC23.15■■□□□ 1.3
LBX1P52954 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
LBX1P52954 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LBX1P52954 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC23.15■■□□□ 1.3
LBX1P52954 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.15■■□□□ 1.3
LBX1P52954 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
LBX1P52954 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
LBX1P52954 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
LBX1P52954 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC23.14■■□□□ 1.29
LBX1P52954 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
LBX1P52954 AC142381.3-201ENST00000568208 1670 ntBASIC23.14■■□□□ 1.29
LBX1P52954 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
LBX1P52954 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC23.14■■□□□ 1.29
LBX1P52954 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC23.14■■□□□ 1.29
LBX1P52954 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
LBX1P52954 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
LBX1P52954 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
LBX1P52954 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
LBX1P52954 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
LBX1P52954 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC23.13■■□□□ 1.29
LBX1P52954 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
LBX1P52954 ANKRD20A18P-201ENST00000359341 492 ntBASIC23.13■■□□□ 1.29
LBX1P52954 ATP5G2P1-201ENST00000433580 426 ntBASIC23.13■■□□□ 1.29
LBX1P52954 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC23.13■■□□□ 1.29
LBX1P52954 VENTXP5-201ENST00000523979 775 ntBASIC23.13■■□□□ 1.29
LBX1P52954 AC141257.4-201ENST00000634557 245 ntBASIC23.13■■□□□ 1.29
LBX1P52954 AC136944.6-201ENST00000634818 245 ntBASIC23.13■■□□□ 1.29
LBX1P52954 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LBX1P52954 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
LBX1P52954 AC092053.2-201ENST00000640557 1818 ntBASIC23.12■■□□□ 1.29
LBX1P52954 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.12■■□□□ 1.29
LBX1P52954 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LBX1P52954 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LBX1P52954 HIST1H2APS4-201ENST00000362070 348 ntBASIC23.12■■□□□ 1.29
LBX1P52954 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
LBX1P52954 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC23.12■■□□□ 1.29
LBX1P52954 CKBP1-201ENST00000565489 1086 ntBASIC23.12■■□□□ 1.29
LBX1P52954 PRELID1P1-202ENST00000567272 903 ntBASIC23.12■■□□□ 1.29
LBX1P52954 AC111152.3-201ENST00000569699 673 ntBASIC23.12■■□□□ 1.29
LBX1P52954 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
LBX1P52954 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
LBX1P52954 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
LBX1P52954 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC23.12■■□□□ 1.29
LBX1P52954 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LBX1P52954 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
LBX1P52954 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
LBX1P52954 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
LBX1P52954 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
LBX1P52954 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
LBX1P52954 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
LBX1P52954 FXN-203ENST00000396366 922 ntTSL 2 BASIC23.11■■□□□ 1.29
LBX1P52954 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
LBX1P52954 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC23.11■■□□□ 1.29
LBX1P52954 B3GAT3P1-201ENST00000471720 806 ntBASIC23.11■■□□□ 1.29
LBX1P52954 FDX2-206ENST00000492239 773 ntTSL 2 BASIC23.11■■□□□ 1.29
LBX1P52954 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
LBX1P52954 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
LBX1P52954 GXYLT1P4-201ENST00000613576 1192 ntBASIC23.11■■□□□ 1.29
LBX1P52954 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC23.11■■□□□ 1.29
LBX1P52954 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
LBX1P52954 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
LBX1P52954 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
LBX1P52954 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
LBX1P52954 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC23.11■■□□□ 1.29
LBX1P52954 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
LBX1P52954 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms