Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.83■□□□□ 0.77
CLCNKAP51800 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.83■□□□□ 0.77
CLCNKAP51800 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CLCNKAP51800 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLCNKAP51800 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CLCNKAP51800 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CLCNKAP51800 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.83■□□□□ 0.77
CLCNKAP51800 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.83■□□□□ 0.77
CLCNKAP51800 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.83■□□□□ 0.77
CLCNKAP51800 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.83■□□□□ 0.77
CLCNKAP51800 UNC93B4-201ENST00000505679 747 ntBASIC19.83■□□□□ 0.77
CLCNKAP51800 AP003097.1-201ENST00000530657 1135 ntBASIC19.83■□□□□ 0.77
CLCNKAP51800 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.83■□□□□ 0.77
CLCNKAP51800 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLCNKAP51800 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.83■□□□□ 0.76
CLCNKAP51800 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
CLCNKAP51800 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CLCNKAP51800 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLCNKAP51800 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLCNKAP51800 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.82■□□□□ 0.76
CLCNKAP51800 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLCNKAP51800 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLCNKAP51800 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLCNKAP51800 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.82■□□□□ 0.76
CLCNKAP51800 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLCNKAP51800 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLCNKAP51800 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLCNKAP51800 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.82■□□□□ 0.76
CLCNKAP51800 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CLCNKAP51800 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.82■□□□□ 0.76
CLCNKAP51800 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.82■□□□□ 0.76
CLCNKAP51800 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CLCNKAP51800 AC008403.3-201ENST00000598924 454 ntBASIC19.82■□□□□ 0.76
CLCNKAP51800 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.82■□□□□ 0.76
CLCNKAP51800 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLCNKAP51800 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLCNKAP51800 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLCNKAP51800 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLCNKAP51800 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CLCNKAP51800 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CLCNKAP51800 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLCNKAP51800 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLCNKAP51800 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.81■□□□□ 0.76
CLCNKAP51800 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.81■□□□□ 0.76
CLCNKAP51800 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLCNKAP51800 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLCNKAP51800 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLCNKAP51800 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLCNKAP51800 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLCNKAP51800 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CLCNKAP51800 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLCNKAP51800 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLCNKAP51800 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
CLCNKAP51800 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.81■□□□□ 0.76
CLCNKAP51800 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.81■□□□□ 0.76
CLCNKAP51800 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLCNKAP51800 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.81■□□□□ 0.76
CLCNKAP51800 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.81■□□□□ 0.76
CLCNKAP51800 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLCNKAP51800 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLCNKAP51800 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.81■□□□□ 0.76
CLCNKAP51800 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLCNKAP51800 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLCNKAP51800 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.81■□□□□ 0.76
CLCNKAP51800 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLCNKAP51800 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLCNKAP51800 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLCNKAP51800 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CLCNKAP51800 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLCNKAP51800 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLCNKAP51800 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLCNKAP51800 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.8■□□□□ 0.76
CLCNKAP51800 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLCNKAP51800 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.8■□□□□ 0.76
CLCNKAP51800 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLCNKAP51800 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CLCNKAP51800 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLCNKAP51800 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.8■□□□□ 0.76
CLCNKAP51800 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLCNKAP51800 AC005829.2-201ENST00000571422 1056 ntBASIC19.8■□□□□ 0.76
CLCNKAP51800 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.8■□□□□ 0.76
CLCNKAP51800 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLCNKAP51800 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLCNKAP51800 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLCNKAP51800 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.8■□□□□ 0.76
CLCNKAP51800 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLCNKAP51800 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLCNKAP51800 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLCNKAP51800 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.8■□□□□ 0.76
CLCNKAP51800 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLCNKAP51800 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CLCNKAP51800 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CLCNKAP51800 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLCNKAP51800 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLCNKAP51800 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLCNKAP51800 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLCNKAP51800 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLCNKAP51800 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLCNKAP51800 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLCNKAP51800 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms