Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HCFC1P51610 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HCFC1P51610 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HCFC1P51610 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.72■□□□□ 0.43
HCFC1P51610 PRKY-204ENST00000533551 1019 ntBASIC17.72■□□□□ 0.43
HCFC1P51610 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.72■□□□□ 0.43
HCFC1P51610 AL353708.3-201ENST00000610272 989 ntBASIC17.72■□□□□ 0.43
HCFC1P51610 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
HCFC1P51610 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC17.72■□□□□ 0.43
HCFC1P51610 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HCFC1P51610 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.72■□□□□ 0.43
HCFC1P51610 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.72■□□□□ 0.43
HCFC1P51610 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
HCFC1P51610 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.72■□□□□ 0.43
HCFC1P51610 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HCFC1P51610 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HCFC1P51610 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HCFC1P51610 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.72■□□□□ 0.43
HCFC1P51610 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.72■□□□□ 0.43
HCFC1P51610 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.72■□□□□ 0.43
HCFC1P51610 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.72■□□□□ 0.43
HCFC1P51610 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.72■□□□□ 0.43
HCFC1P51610 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HCFC1P51610 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
HCFC1P51610 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HCFC1P51610 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.72■□□□□ 0.43
HCFC1P51610 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HCFC1P51610 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HCFC1P51610 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HCFC1P51610 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.71■□□□□ 0.43
HCFC1P51610 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HCFC1P51610 KRT8P9-201ENST00000558927 1449 ntBASIC17.71■□□□□ 0.43
HCFC1P51610 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HCFC1P51610 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.71■□□□□ 0.43
HCFC1P51610 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
HCFC1P51610 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.71■□□□□ 0.43
HCFC1P51610 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
HCFC1P51610 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HCFC1P51610 FBXW4P1-201ENST00000426721 2239 ntBASIC17.71■□□□□ 0.43
HCFC1P51610 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HCFC1P51610 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HCFC1P51610 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.71■□□□□ 0.42
HCFC1P51610 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.71■□□□□ 0.42
HCFC1P51610 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.71■□□□□ 0.42
HCFC1P51610 KRT16P5-201ENST00000455284 522 ntBASIC17.71■□□□□ 0.42
HCFC1P51610 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.71■□□□□ 0.42
HCFC1P51610 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
HCFC1P51610 AL121829.2-201ENST00000620908 328 ntBASIC17.71■□□□□ 0.42
HCFC1P51610 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.7■□□□□ 0.42
HCFC1P51610 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HCFC1P51610 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HCFC1P51610 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HCFC1P51610 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.7■□□□□ 0.42
HCFC1P51610 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.7■□□□□ 0.42
HCFC1P51610 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
HCFC1P51610 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HCFC1P51610 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HCFC1P51610 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HCFC1P51610 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.7■□□□□ 0.42
HCFC1P51610 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
HCFC1P51610 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.7■□□□□ 0.42
HCFC1P51610 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
HCFC1P51610 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.7■□□□□ 0.42
HCFC1P51610 MIR2861-201ENST00000636310 90 ntBASIC17.7■□□□□ 0.42
HCFC1P51610 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HCFC1P51610 GOLGA2P6-201ENST00000340929 2049 ntBASIC17.7■□□□□ 0.42
HCFC1P51610 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.7■□□□□ 0.42
HCFC1P51610 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
HCFC1P51610 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
HCFC1P51610 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.69■□□□□ 0.42
HCFC1P51610 AL353807.1-201ENST00000427475 662 ntBASIC17.69■□□□□ 0.42
HCFC1P51610 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.69■□□□□ 0.42
HCFC1P51610 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HCFC1P51610 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.69■□□□□ 0.42
HCFC1P51610 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.69■□□□□ 0.42
HCFC1P51610 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.69■□□□□ 0.42
HCFC1P51610 AP003071.4-201ENST00000562276 1284 ntBASIC17.69■□□□□ 0.42
HCFC1P51610 AL121906.2-201ENST00000621597 723 ntBASIC17.69■□□□□ 0.42
HCFC1P51610 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
HCFC1P51610 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
HCFC1P51610 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HCFC1P51610 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HCFC1P51610 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HCFC1P51610 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HCFC1P51610 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.69■□□□□ 0.42
HCFC1P51610 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.69■□□□□ 0.42
HCFC1P51610 MIR6786-201ENST00000616843 113 ntBASIC17.69■□□□□ 0.42
HCFC1P51610 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.69■□□□□ 0.42
HCFC1P51610 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HCFC1P51610 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
HCFC1P51610 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HCFC1P51610 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.68■□□□□ 0.42
HCFC1P51610 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.68■□□□□ 0.42
HCFC1P51610 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HCFC1P51610 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HCFC1P51610 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
HCFC1P51610 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
HCFC1P51610 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.68■□□□□ 0.42
HCFC1P51610 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.68■□□□□ 0.42
HCFC1P51610 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms