Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRP9P49458 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRP9P49458 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRP9P49458 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRP9P49458 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.88■□□□□ 0.45
SRP9P49458 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRP9P49458 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SRP9P49458 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRP9P49458 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.88■□□□□ 0.45
SRP9P49458 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.88■□□□□ 0.45
SRP9P49458 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SRP9P49458 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SRP9P49458 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.88■□□□□ 0.45
SRP9P49458 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
SRP9P49458 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRP9P49458 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.88■□□□□ 0.45
SRP9P49458 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRP9P49458 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRP9P49458 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRP9P49458 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SRP9P49458 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRP9P49458 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SRP9P49458 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SRP9P49458 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SRP9P49458 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SRP9P49458 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
SRP9P49458 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.87■□□□□ 0.45
SRP9P49458 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SRP9P49458 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SRP9P49458 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.87■□□□□ 0.45
SRP9P49458 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.87■□□□□ 0.45
SRP9P49458 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.87■□□□□ 0.45
SRP9P49458 KRT18P20-201ENST00000548986 1279 ntBASIC17.87■□□□□ 0.45
SRP9P49458 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.87■□□□□ 0.45
SRP9P49458 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.87■□□□□ 0.45
SRP9P49458 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SRP9P49458 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SRP9P49458 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SRP9P49458 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRP9P49458 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SRP9P49458 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SRP9P49458 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SRP9P49458 AC016769.1-201ENST00000409132 1010 ntBASIC17.86■□□□□ 0.45
SRP9P49458 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.86■□□□□ 0.45
SRP9P49458 AC137761.2-201ENST00000561729 223 ntBASIC17.86■□□□□ 0.45
SRP9P49458 AC145350.3-201ENST00000569033 163 ntBASIC17.86■□□□□ 0.45
SRP9P49458 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRP9P49458 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SRP9P49458 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SRP9P49458 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRP9P49458 AC121338.2-201ENST00000622535 1744 ntBASIC17.86■□□□□ 0.45
SRP9P49458 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SRP9P49458 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.86■□□□□ 0.45
SRP9P49458 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRP9P49458 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRP9P49458 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRP9P49458 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
SRP9P49458 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
SRP9P49458 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRP9P49458 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRP9P49458 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRP9P49458 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
SRP9P49458 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.85■□□□□ 0.45
SRP9P49458 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRP9P49458 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRP9P49458 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRP9P49458 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
SRP9P49458 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRP9P49458 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRP9P49458 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.85■□□□□ 0.45
SRP9P49458 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.85■□□□□ 0.45
SRP9P49458 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.85■□□□□ 0.45
SRP9P49458 KRT18P11-201ENST00000435214 1283 ntBASIC17.85■□□□□ 0.45
SRP9P49458 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRP9P49458 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRP9P49458 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.85■□□□□ 0.45
SRP9P49458 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.85■□□□□ 0.45
SRP9P49458 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SRP9P49458 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
SRP9P49458 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRP9P49458 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.85■□□□□ 0.45
SRP9P49458 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRP9P49458 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.84■□□□□ 0.45
SRP9P49458 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRP9P49458 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRP9P49458 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRP9P49458 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRP9P49458 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRP9P49458 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SRP9P49458 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRP9P49458 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRP9P49458 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.84■□□□□ 0.45
SRP9P49458 BX323043.1-201ENST00000641006 1765 ntBASIC17.84■□□□□ 0.45
SRP9P49458 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SRP9P49458 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
SRP9P49458 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRP9P49458 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.84■□□□□ 0.45
SRP9P49458 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRP9P49458 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRP9P49458 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms