Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
XPAP23025 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
XPAP23025 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
XPAP23025 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.39■□□□□ 0.85
XPAP23025 KRT8P36-201ENST00000489121 1440 ntBASIC20.39■□□□□ 0.85
XPAP23025 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.39■□□□□ 0.85
XPAP23025 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
XPAP23025 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
XPAP23025 MIR4651-201ENST00000582622 73 ntBASIC20.39■□□□□ 0.85
XPAP23025 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.39■□□□□ 0.85
XPAP23025 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
XPAP23025 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
XPAP23025 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
XPAP23025 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
XPAP23025 FP700111.2-201ENST00000619190 1892 ntBASIC20.39■□□□□ 0.85
XPAP23025 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
XPAP23025 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.85
XPAP23025 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
XPAP23025 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
XPAP23025 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
XPAP23025 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.38■□□□□ 0.85
XPAP23025 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
XPAP23025 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
XPAP23025 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
XPAP23025 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.38■□□□□ 0.85
XPAP23025 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.38■□□□□ 0.85
XPAP23025 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
XPAP23025 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
XPAP23025 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
XPAP23025 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.37■□□□□ 0.85
XPAP23025 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
XPAP23025 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.37■□□□□ 0.85
XPAP23025 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
XPAP23025 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
XPAP23025 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.37■□□□□ 0.85
XPAP23025 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.37■□□□□ 0.85
XPAP23025 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.37■□□□□ 0.85
XPAP23025 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.37■□□□□ 0.85
XPAP23025 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
XPAP23025 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
XPAP23025 AC007375.3-201ENST00000600936 2314 ntBASIC20.37■□□□□ 0.85
XPAP23025 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
XPAP23025 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
XPAP23025 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
XPAP23025 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
XPAP23025 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
XPAP23025 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.37■□□□□ 0.85
XPAP23025 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
XPAP23025 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.36■□□□□ 0.85
XPAP23025 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.36■□□□□ 0.85
XPAP23025 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
XPAP23025 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
XPAP23025 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
XPAP23025 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.36■□□□□ 0.85
XPAP23025 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
XPAP23025 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
XPAP23025 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.36■□□□□ 0.85
XPAP23025 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
XPAP23025 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
XPAP23025 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
XPAP23025 ABHD17AP1-201ENST00000358206 933 ntBASIC20.36■□□□□ 0.85
XPAP23025 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.36■□□□□ 0.85
XPAP23025 PNMA6B-201ENST00000538162 1200 ntBASIC20.36■□□□□ 0.85
XPAP23025 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.36■□□□□ 0.85
XPAP23025 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.36■□□□□ 0.85
XPAP23025 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.36■□□□□ 0.85
XPAP23025 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
XPAP23025 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
XPAP23025 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
XPAP23025 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
XPAP23025 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
XPAP23025 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
XPAP23025 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
XPAP23025 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
XPAP23025 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
XPAP23025 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
XPAP23025 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.35■□□□□ 0.85
XPAP23025 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
XPAP23025 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
XPAP23025 POU5F1P3-201ENST00000428824 1078 ntBASIC20.35■□□□□ 0.85
XPAP23025 UNC93B5-201ENST00000530315 699 ntBASIC20.35■□□□□ 0.85
XPAP23025 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
XPAP23025 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.35■□□□□ 0.85
XPAP23025 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.35■□□□□ 0.85
XPAP23025 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
XPAP23025 CLDN5-201ENST00000403084 2357 ntBASIC20.35■□□□□ 0.85
XPAP23025 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
XPAP23025 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
XPAP23025 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.34■□□□□ 0.85
XPAP23025 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
XPAP23025 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
XPAP23025 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
XPAP23025 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
XPAP23025 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
XPAP23025 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
XPAP23025 ESRRAP1-201ENST00000400596 1257 ntBASIC20.34■□□□□ 0.85
XPAP23025 AL390719.1-204ENST00000412397 1219 ntBASIC20.34■□□□□ 0.85
XPAP23025 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.34■□□□□ 0.85
XPAP23025 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
XPAP23025 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms